C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 4, regulatory subunit 1-like, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153162 Ppp4r1l-ps-003 ENSMUSG00000055897 10090 - 2:173584905-173659539 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153162
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153162 2.389±0.82 2.912±0.64 4.497±0.19 3.170±1.89 2.592±0.33 1.932±0.10 0.529±0.00 1.732±0.37 1.819±0.37 2.660±0.20 1.384±0.49 4.925±1.76 1.872±0.42 3.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028J CIL_00028J_0002 CGP 2:173568666-173707343

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244070 PPP4R1L-005 processed_transcript Homo_sapiens 1e-18 99
ENST00000493688 PPP4R1L-003 processed_transcript Homo_sapiens 2e-18 99

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