C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: capping protein (actin filament), gelsolin-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056737 Capg 10090 + 6:72544391-72562983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071044 Capg-003 72544391-72562983 protein_coding
  ENSMUST00000114071 Capg-001 72549273-72562983 protein_coding
  ENSMUST00000114072 Capg-002 72544537-72562981 protein_coding
  ENSMUST00000126101 Capg-009 72552938-72558257 protein_coding
  ENSMUST00000126124 Capg-006 72547940-72557770 protein_coding
  ENSMUST00000127770 Capg-012 72555979-72557847 retained_intron
  ENSMUST00000134809 Capg-008 72549652-72555824 protein_coding
  ENSMUST00000137435 Capg-011 72549432-72557741 retained_intron
  ENSMUST00000155188 Capg-005 72545793-72556252 protein_coding
  ENSMUST00000155705 Capg-007 72549451-72555866 protein_coding
  ENSMUST00000156168 Capg-010 72549458-72555635 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071044ENSMUST00000114071ENSMUST00000126101ENSMUST00000137435ENSMUST00000155188ENSMUST00000156168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071044 22.518±3.00 15.857±1.10 49.997±3.57 1.079±0.38 32.801±12.58 19.385±2.51 4.754±1.67 31.146±2.41 3.510±2.85 25.668±0.66 3.236±2.63 26.917±8.17 17.067±5.49 1.268±0.54
ENSMUST00000114071 4.610±1.03 N/A 8.821±0.00 0.223±0.00 6.777±2.14 7.853±1.67 1.088±0.02 N/A 1.508±1.32 5.009±0.42 1.485±0.58 N/A 13.046±5.66 0.256±0.01
ENSMUST00000126101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.012±0.55 7.357±0.00 N/A 0.441±0.00
ENSMUST00000137435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.398±0.00
ENSMUST00000155188 N/A 12.235±1.70 N/A N/A 30.827±0.00 8.294±0.23 N/A N/A 0.298±0.00 N/A N/A 10.026±0.13 N/A N/A
ENSMUST00000156168 N/A N/A N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0030031 IDA cell projection assembly
GO:0031965 IEA nuclear membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021318 capgb capping protein (actin filament), gelsolin-like b protein_coding Danio_rerio
ENSDARG00000035560 capga capping protein (actin filament), gelsolin-like a protein_coding Danio_rerio
ENSG00000042493 CAPG capping protein (actin filament), gelsolin-like protein_coding Homo_sapiens

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