C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: capping protein (actin filament), gelsolin-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000042493 CAPG 9606 - 2:85394748-85418432 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263867 CAPG-001 85394748-85410553 protein_coding
  ENST00000409275 CAPG-012 85399146-85418432 protein_coding
  ENST00000409670 CAPG-003 85394828-85414042 protein_coding
  ENST00000409724 CAPG-002 85394893-85414074 protein_coding
  ENST00000409921 CAPG-004 85394767-85410370 protein_coding
  ENST00000415012 CAPG-009 85401172-85413213 processed_transcript
  ENST00000439385 CAPG-005 85398690-85408815 protein_coding
  ENST00000447219 CAPG-008 85398690-85414039 protein_coding
  ENST00000449030 CAPG-011 85398690-85409832 protein_coding
  ENST00000453973 CAPG-016 85394753-85398734 protein_coding
  ENST00000459793 CAPG-007 85398720-85410352 retained_intron
  ENST00000471064 CAPG-015 85394895-85398352 retained_intron
  ENST00000479651 CAPG-010 85402138-85413974 processed_transcript
  ENST00000483659 CAPG-014 85395575-85401671 processed_transcript
  ENST00000491267 CAPG-006 85401645-85414018 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263867ENST00000409275ENST00000409670ENST00000409724ENST00000409921ENST00000439385ENST00000449030ENST00000453973ENST00000459793ENST00000471064ENST00000483659
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263867 N/A N/A N/A 1.469±0.00 N/A N/A N/A N/A N/A N/A N/A 23.441±0.00 N/A N/A
ENST00000409275 N/A N/A N/A 0.958±0.00 7.117±0.00 N/A N/A N/A N/A N/A N/A 5.321±0.00 N/A N/A
ENST00000409670 N/A N/A N/A N/A N/A N/A 0.469±0.00 20.115±0.00 N/A N/A N/A 11.249±0.00 35.590±20.03 N/A
ENST00000409724 7.451±0.00 18.685±0.00 1.931±0.00 8.618±0.00 16.098±13.25 3.688±2.15 0.693±0.00 48.543±0.00 1.028±0.00 19.745±15.63 2.287±0.00 38.056±45.55 30.481±0.00 10.904±3.93
ENST00000409921 1.973±0.00 7.492±0.00 N/A 1.949±1.29 7.631±5.44 2.339±0.00 N/A N/A 1.238±0.91 17.209±11.60 9.672±0.00 12.457±6.88 20.771±4.55 7.170±0.00
ENST00000439385 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A 8.011±0.00 N/A N/A N/A N/A
ENST00000449030 N/A N/A N/A N/A N/A 1.764±0.00 N/A 0.018±0.00 1.908±0.00 N/A N/A 3.417±0.00 N/A N/A
ENST00000453973 N/A 12.433±0.00 N/A 3.787±0.00 N/A N/A 0.303±0.00 30.563±0.00 N/A 35.017±0.00 N/A 87.112±0.00 25.511±0.00 11.602±0.00
ENST00000459793 N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A
ENST00000471064 N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A
ENST00000483659 N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A 0.404±0.00 N/A N/A 10.220±0.00 12.255±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AX CIL_0009AX_0001 VISTA 2:84977509-85579132

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006461 NAS protein complex assembly
GO:0008290 TAS F-actin capping protein complex
GO:0030031 IEA cell projection assembly
GO:0031965 IDA nuclear membrane
GO:0051016 TAS barbed-end actin filament capping
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021318 capgb capping protein (actin filament), gelsolin-like b protein_coding Danio_rerio
ENSDARG00000035560 capga capping protein (actin filament), gelsolin-like a protein_coding Danio_rerio
ENSMUSG00000056737 Capg capping protein (actin filament), gelsolin-like protein_coding Mus_musculus

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