C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056812 St8sia3 10090 + 18:64254359-64276146 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025477 St8sia3-001 64254359-64276146 protein_coding
  ENSMUST00000129518 St8sia3-004 64266808-64269908 retained_intron
  ENSMUST00000134064 St8sia3-003 64266177-64269836 processed_transcript
  ENSMUST00000139622 St8sia3-002 64265996-64269979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000025477ENSMUST00000129518ENSMUST00000134064ENSMUST00000139622
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000025477 0.383±0.03 0.013±0.00 4.380±0.00 0.042±0.02 0.010±0.00 0.180±0.15 0.014±0.01 0.009±0.00 0.006±0.00 8.142±4.17
ENSMUST00000129518 N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000134064 N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A
ENSMUST00000139622 N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A 0.035±0.00 14.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OB CIL_0006OB_0002 CGP 18:64254359-64398488

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001574 IEA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0006491 IEA N-glycan processing
GO:0009100 IEA glycoprotein metabolic process
GO:0009311 IEA oligosaccharide metabolic process
GO:0016021 IEA integral component of membrane
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045301 st8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein_coding Danio_rerio
ENSG00000177511 ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 protein_coding Homo_sapiens

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