C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025477 St8sia3-001 ENSMUSG00000056812 10090 + 18:64254359-64276146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000025477
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000025477 0.383±0.03 0.013±0.00 4.380±0.00 0.042±0.02 0.010±0.00 0.180±0.15 0.014±0.01 0.009±0.00 0.006±0.00 8.142±4.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OB CIL_0006OB_0002 CGP 18:64254359-64398488

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001574 IEA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006491 IEA N-glycan processing
GO:0009100 IEA glycoprotein metabolic process
GO:0009311 IEA oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324000 ST8SIA3-001 protein_coding Homo_sapiens 0 1986
ENST00000586360 ST8SIA3-003 protein_coding Homo_sapiens 0 394

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