C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006OB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177511-ENSG00000119547 CGP 9606 18:57350813-57491297
GeneTranscriptPositionBiotype
ENSG00000177511 (ST8SIA3)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 		ENST00000324000 (ST8SIA3-001) 57350813-57368933 protein_coding
ENST00000586360 (ST8SIA3-003) 57357152-57371731 protein_coding
ENST00000590600 (ST8SIA3-002) 57363513-57368933 processed_transcript
ENSG00000277837 (RP11-714M23.2)
 ENST00000620778 (RP11-714M23.2-001) 57427133-57432112 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006OB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056812-ENSMUSG00000045991 CGP 10090 18:64254359-64398488
GeneTranscriptPositionBiotype
ENSMUSG00000045991 (Onecut2)
one cut domain, family member 2 		ENSMUST00000115145 (Onecut2-201) 64340364-64398486 protein_coding
ENSMUST00000175965 (Onecut2-001) 64340364-64398488 protein_coding
ENSMUSG00000056812 (St8sia3)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 		ENSMUST00000025477 (St8sia3-001) 64254359-64276146 protein_coding
ENSMUST00000129518 (St8sia3-004) 64266808-64269908 retained_intron
ENSMUST00000134064 (St8sia3-003) 64266177-64269836 processed_transcript
ENSMUST00000139622 (St8sia3-002) 64265996-64269979 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OB_0001ENSG00000177511ENST00000324000ENST00000586360ENST00000590600ENSG00000277837ENST00000620778CIL_0006OB_0002ENSMUSG00000045991ENSMUST00000115145ENSMUST00000175965ENSMUSG00000056812ENSMUST00000025477ENSMUST00000129518ENSMUST00000134064ENSMUST00000139622
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OB_0001ENSG00000177511ENST00000324000ENSG00000277837ENST00000620778CIL_0006OB_0002ENSMUSG00000045991ENSMUST00000115145ENSMUST00000175965ENSMUSG00000056812ENSMUST00000025477ENSMUST00000129518ENSMUST00000134064ENSMUST00000139622
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177511 ENST00000324000 N/A N/A N/A 8.183±0.59 0.051±0.04 0.062±0.05 0.001±0.00 0.169±0.16 0.013±0.00 0.009±0.01 0.003±0.00 0.001±0.00 0.006±0.00 0.263±0.05
ENST00000586360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277837 ENST00000620778 N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.095±0.00 0.449±0.00 N/A N/A N/A 0.010±0.00 1.266±0.64
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045991 ENSMUST00000115145 0.002±0.00 0.029±0.01 0.003±0.00 0.121±0.00 0.003±0.00 0.008±0.00 0.005±0.00 0.003±0.00 2.066±1.62 N/A 0.001±0.00 0.714±0.30 0.043±0.04 0.008±0.01
ENSMUST00000175965 0.002±0.00 0.029±0.01 0.003±0.00 0.354±0.23 0.003±0.00 0.008±0.00 0.005±0.00 0.003±0.00 1.799±1.20 N/A 0.001±0.00 0.809±0.54 0.043±0.04 0.008±0.01
ENSMUSG00000056812 ENSMUST00000025477 N/A 0.383±0.03 0.013±0.00 4.380±0.00 N/A 0.042±0.02 N/A 0.010±0.00 0.180±0.15 0.014±0.01 N/A 0.009±0.00 0.006±0.00 8.142±4.17
ENSMUST00000129518 N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A
ENSMUST00000139622 N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A N/A N/A N/A N/A 0.035±0.00 14.216±0.00

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