C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: centrosomal protein 162
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000056919 Cep162 10090 - 9:87189577-87255536 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093802 Cep162-001 87189577-87255536 protein_coding
  ENSMUST00000139301 Cep162-003 87204015-87209910 processed_transcript
  ENSMUST00000144137 Cep162-002 87225721-87255288 retained_intron
  ENSMUST00000188289 Cep162-004 87224963-87227958 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093802ENSMUST00000139301ENSMUST00000144137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093802 0.535±0.08 0.243±0.09 1.083±0.04 2.214±0.99 0.254±0.06 0.459±0.14 0.112±0.04 0.492±0.13 0.507±0.45 0.531±0.03 0.340±0.07 1.576±1.37 2.540±1.99 2.508±2.85
ENSMUST00000139301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.782±5.04 61.558±0.00
ENSMUST00000144137 N/A N/A N/A N/A 0.439±0.00 N/A 0.140±0.00 0.492±0.00 N/A N/A N/A 0.825±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000819 CIL_000819_0002 VISTA 9:86855250-87464091
CIL_000674 CIL_000674_0002 CGP 9:87144306-87255536
CIL_00066X CIL_00066X_0002 CGP 9:87189577-87731260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0005879 ISS axonemal microtubule
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087369 CEP162 centrosomal protein 162kDa protein_coding Danio_rerio
ENSG00000135315 CEP162 centrosomal protein 162kDa protein_coding Homo_sapiens

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