C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 162
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093802 Cep162-001 ENSMUSG00000056919 10090 - 9:87189577-87255536 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093802 0.535±0.08 0.243±0.09 1.083±0.04 2.214±0.99 0.254±0.06 0.459±0.14 0.112±0.04 0.492±0.13 0.507±0.45 0.531±0.03 0.340±0.07 1.576±1.37 2.540±1.99 2.508±2.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000819 CIL_000819_0002 VISTA 9:86855250-87464091
CIL_000674 CIL_000674_0002 CGP 9:87144306-87255536
CIL_00066X CIL_00066X_0002 CGP 9:87189577-87731260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0005879 ISS axonemal microtubule
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257766 CEP162-001 protein_coding Homo_sapiens 0 3075
ENST00000403245 CEP162-004 protein_coding Homo_sapiens 0 3264
ENST00000435955 CEP162-006 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000461137 CEP162-003 processed_transcript Homo_sapiens 0 2510
ENST00000487999 CEP162-005 retained_intron Homo_sapiens 0 1245
ENST00000497936 CEP162-002 processed_transcript Homo_sapiens 0 1225
ENST00000617909 CEP162-201 protein_coding Homo_sapiens 0 3075

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