C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00066X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135315-ENSG00000112837 CGP 9606 6:84124241-84764519
GeneTranscriptPositionBiotype
ENSG00000112837 (TBX18)
T-box 18 		ENST00000330469 (TBX18-007) 84687351-84688747 retained_intron
ENST00000369663 (TBX18-001) 84732602-84764519 protein_coding
ENST00000606325 (TBX18-003) 84744261-84763453 protein_coding
ENST00000606521 (TBX18-004) 84742024-84763448 processed_transcript
ENST00000606621 (TBX18-002) 84760283-84763355 protein_coding
ENST00000606784 (TBX18-006) 84687373-84763453 protein_coding
ENST00000607343 (TBX18-005) 84741067-84741802 processed_transcript
ENSG00000135315 (CEP162)
centrosomal protein 162kDa 		ENST00000257766 (CEP162-001) 84124241-84227596 protein_coding
ENST00000403245 (CEP162-004) 84124241-84227635 protein_coding
ENST00000435955 (CEP162-006) 84215408-84227617 nonsense_mediated_decay
ENST00000461137 (CEP162-003) 84124241-84195030 processed_transcript
ENST00000487999 (CEP162-005) 84124955-84155594 retained_intron
ENST00000497936 (CEP162-002) 84174772-84227608 processed_transcript
ENST00000617909 (CEP162-201) 84124242-84227635 protein_coding
ENSG00000219604 (RP11-132M7.2)
 ENST00000405071 (RP11-132M7.2-001) 84689292-84689429 processed_pseudogene
ENSG00000226309 (SMARCE1P2)
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 2 		ENST00000442896 (SMARCE1P2-001) 84429584-84430802 processed_pseudogene
ENSG00000228290 (RP11-132M7.3)
 ENST00000423086 (RP11-132M7.3-001) 84689505-84709534 antisense
ENST00000441863 (RP11-132M7.3-002) 84694987-84709527 antisense
ENST00000586398 (RP11-132M7.3-005) 84689460-84709446 antisense
ENST00000586938 (RP11-132M7.3-009) 84697512-84709504 antisense
ENST00000587281 (RP11-132M7.3-006) 84689460-84709496 antisense
ENST00000589304 (RP11-132M7.3-003) 84689425-84709504 antisense
ENST00000590270 (RP11-132M7.3-007) 84689461-84709493 antisense
ENST00000591225 (RP11-132M7.3-008) 84689461-84707614 antisense
ENST00000592681 (RP11-132M7.3-004) 84689449-84709493 antisense
ENST00000620850 (RP11-132M7.3-010) 84689452-84709481 antisense
ENSG00000231776 (RP1-90L14.1)
 ENST00000428896 (RP1-90L14.1-002) 84421048-84474929 lincRNA
ENST00000454172 (RP1-90L14.1-003) 84421031-84556152 lincRNA
ENST00000454981 (RP1-90L14.1-001) 84421028-84470904 lincRNA
CIL_00066X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000056919-ENSMUSG00000032419 CGP 10090 9:87189577-87731260
GeneTranscriptPositionBiotype
ENSMUSG00000032419 (Tbx18)
T-box18 		ENSMUST00000034991 (Tbx18-001) 87702800-87731260 protein_coding
ENSMUST00000186698 (Tbx18-002) 87724397-87730497 processed_transcript
ENSMUSG00000056919 (Cep162)
centrosomal protein 162 		ENSMUST00000093802 (Cep162-001) 87189577-87255536 protein_coding
ENSMUST00000139301 (Cep162-003) 87204015-87209910 processed_transcript
ENSMUST00000144137 (Cep162-002) 87225721-87255288 retained_intron
ENSMUST00000188289 (Cep162-004) 87224963-87227958 retained_intron
ENSMUSG00000087731 (Gm24649)
predicted gene, 24649 		ENSMUST00000157106 (Gm24649-201) 87200109-87200242 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066X_0001ENSG00000112837ENST00000330469ENST00000369663ENST00000606325ENST00000606521ENST00000606621ENST00000606784ENST00000607343ENSG00000135315ENST00000257766ENST00000403245ENST00000435955ENST00000461137ENST00000487999ENST00000497936ENST00000617909ENSG00000219604ENST00000405071ENSG00000226309ENST00000442896ENSG00000228290ENST00000423086ENST00000441863ENST00000586398ENST00000586938ENST00000587281ENST00000589304ENST00000590270ENST00000591225ENST00000592681ENST00000620850ENSG00000231776ENST00000428896ENST00000454172ENST00000454981CIL_00066X_0002ENSMUSG00000032419ENSMUST00000034991ENSMUST00000186698ENSMUSG00000056919ENSMUST00000093802ENSMUST00000139301ENSMUST00000144137ENSMUST00000188289ENSMUSG00000087731ENSMUST00000157106
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00066X_0001ENSG00000112837ENST00000330469ENST00000369663ENST00000606325ENST00000606784ENST00000607343ENSG00000135315ENST00000257766ENST00000403245ENST00000461137ENST00000487999ENST00000497936ENST00000617909ENSG00000219604ENST00000405071ENSG00000226309ENST00000442896ENSG00000228290ENST00000423086ENST00000441863ENST00000586398ENST00000587281ENST00000589304ENST00000590270ENSG00000231776ENST00000428896ENST00000454172CIL_00066X_0002ENSMUSG00000032419ENSMUST00000034991ENSMUSG00000056919ENSMUST00000093802ENSMUST00000139301ENSMUST00000144137ENSMUSG00000087731ENSMUST00000157106
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112837 ENST00000330469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.981±0.00 N/A N/A N/A
ENST00000369663 1.451±0.00 1.052±0.00 N/A 0.107±0.05 0.856±0.51 0.592±0.00 0.474±0.00 N/A 0.556±0.54 0.203±0.00 0.076±0.00 0.506±0.18 0.314±0.05 0.663±0.36
ENST00000606325 N/A N/A N/A 0.578±0.00 N/A N/A 0.662±0.00 N/A 0.075±0.00 N/A 0.962±0.47 N/A N/A N/A
ENST00000606521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606784 N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A
ENST00000607343 0.133±0.00 0.158±0.00 N/A 0.227±0.00 0.402±0.19 0.063±0.01 0.081±0.01 N/A 1.975±0.00 N/A N/A 0.130±0.08 N/A 0.034±0.00
ENSG00000135315 ENST00000257766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.687±0.00
ENST00000403245 0.230±0.00 N/A N/A 0.191±0.12 0.701±0.47 N/A N/A N/A 0.610±0.00 0.171±0.00 N/A 0.540±0.23 0.240±0.15 2.604±1.35
ENST00000435955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461137 N/A 0.285±0.00 N/A 0.231±0.00 0.436±0.00 0.215±0.00 0.131±0.00 0.343±0.00 N/A 0.240±0.00 N/A 0.370±0.07 0.028±0.00 0.693±0.00
ENST00000487999 N/A 0.513±0.00 N/A 0.200±0.00 0.696±0.00 0.879±0.00 0.368±0.00 0.954±0.00 N/A 0.320±0.00 N/A 0.644±0.09 0.495±0.41 8.523±2.82
ENST00000497936 N/A N/A 0.510±0.00 0.650±0.00 1.246±0.00 1.182±0.00 0.473±0.00 0.579±0.00 1.614±0.00 2.510±0.00 0.056±0.00 1.184±0.00 N/A N/A
ENST00000617909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 0.148±0.00 N/A
ENSG00000219604 ENST00000405071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.619±0.00 N/A N/A
ENSG00000226309 ENST00000442896 N/A N/A N/A 0.012±0.00 N/A N/A 0.018±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSG00000228290 ENST00000423086 0.040±0.00 0.175±0.00 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A 8.090±0.00
ENST00000441863 N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 3.624±0.00
ENST00000586398 N/A N/A N/A N/A N/A N/A N/A N/A 0.669±0.00 N/A N/A 0.040±0.00 0.095±0.00 N/A
ENST00000586938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587281 N/A 0.085±0.00 N/A N/A N/A 0.041±0.00 0.121±0.00 N/A 0.078±0.00 N/A 0.096±0.00 N/A N/A N/A
ENST00000589304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.794±0.11
ENST00000590270 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.128±0.00 0.396±0.00 0.315±0.00 N/A N/A N/A
ENST00000591225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000231776 ENST00000428896 0.072±0.00 N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.364±0.00
ENST00000454981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032419 ENSMUST00000034991 1.035±0.65 0.656±0.21 1.188±0.78 0.881±0.69 2.431±0.62 0.046±0.02 0.475±0.25 0.179±0.10 0.013±0.01 0.247±0.18 0.099±0.03 0.089±0.06 0.079±0.06 0.204±0.15
ENSMUST00000186698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000056919 ENSMUST00000093802 0.535±0.08 0.243±0.09 1.083±0.04 2.214±0.99 0.254±0.06 0.459±0.14 0.112±0.04 0.492±0.13 0.507±0.45 0.531±0.03 0.340±0.07 1.576±1.37 2.540±1.99 2.508±2.85
ENSMUST00000139301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.782±5.04 61.558±0.00
ENSMUST00000144137 N/A N/A N/A N/A 0.439±0.00 N/A 0.140±0.00 0.492±0.00 N/A N/A N/A 0.825±0.00 N/A N/A
ENSMUST00000188289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087731 ENSMUST00000157106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 699.886±0.00

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