C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cDNA sequence AB124611
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057191 AB124611 10090 + 9:21526176-21545333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076326 AB124611-003 21526228-21545331 nonsense_mediated_decay
  ENSMUST00000086361 AB124611-001 21526176-21545333 protein_coding
  ENSMUST00000173769 AB124611-002 21526201-21545326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076326ENSMUST00000086361ENSMUST00000173769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076326 N/A N/A N/A N/A N/A 0.196±0.00 0.090±0.00 N/A 0.190±0.00 N/A N/A 0.276±0.00 0.205±0.00 N/A
ENSMUST00000086361 2.588±0.95 1.531±0.39 2.261±0.09 0.346±0.02 8.658±5.33 1.011±0.15 0.505±0.28 0.691±0.16 4.591±4.32 4.326±0.33 0.569±0.50 1.679±0.65 0.623±0.11 0.217±0.03
ENSMUST00000173769 0.659±0.05 N/A 0.509±0.00 0.132±0.01 2.237±0.40 0.592±0.41 0.163±0.00 0.280±0.01 1.389±0.80 0.804±0.00 0.175±0.09 0.878±0.68 0.460±0.28 0.734±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SD CIL_0002SD_0002 CGP 9:21507380-21545333
CIL_0002S5 CIL_0002S5_0002 CGP 9:21526176-21589487

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000214212 C19orf38 chromosome 19 open reading frame 38 protein_coding Homo_sapiens

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