C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099203-ENSG00000214212 CGP 9606 19:10832438-10869790
GeneTranscriptPositionBiotype
ENSG00000079805 (DNM2)
dynamin 2 		ENST00000355667 (DNM2-001) 10718163-10831895 protein_coding
ENST00000359692 (DNM2-002) 10718093-10831884 protein_coding
ENST00000389253 (DNM2-010) 10718131-10831903 protein_coding
ENST00000408974 (DNM2-003) 10718208-10831424 protein_coding
ENST00000585892 (DNM2-006) 10718079-10831047 protein_coding
ENST00000586130 (DNM2-011) 10786430-10786741 retained_intron
ENST00000586939 (DNM2-012) 10718561-10777154 protein_coding
ENST00000587329 (DNM2-021) 10798387-10802599 retained_intron
ENST00000587485 (DNM2-018) 10781374-10793751 processed_transcript
ENST00000587830 (DNM2-022) 10783016-10812300 protein_coding
ENST00000587991 (DNM2-015) 10768553-10775815 processed_transcript
ENST00000588976 (DNM2-013) 10755121-10759801 processed_transcript
ENST00000589106 (DNM2-023) 10829112-10830534 protein_coding
ENST00000590787 (DNM2-009) 10809208-10824806 retained_intron
ENST00000590806 (DNM2-008) 10808519-10831897 retained_intron
ENST00000591118 (DNM2-017) 10781374-10783113 processed_transcript
ENST00000591266 (DNM2-014) 10763099-10772507 processed_transcript
ENST00000591701 (DNM2-019) 10777169-10795746 retained_intron
ENST00000591818 (DNM2-024) 10830338-10833488 protein_coding
ENST00000591819 (DNM2-016) 10769289-10777202 processed_transcript
ENST00000593203 (DNM2-007) 10823224-10833484 retained_intron
ENST00000593220 (DNM2-020) 10795716-10798562 retained_intron
ENSG00000099203 (TMED1)
transmembrane emp24 protein transport domain containing 1 		ENST00000214869 (TMED1-001) 10832438-10836290 protein_coding
ENST00000586835 (TMED1-004) 10832687-10835004 protein_coding
ENST00000588259 (TMED1-005) 10832975-10836201 nonsense_mediated_decay
ENST00000588289 (TMED1-003) 10832985-10835632 protein_coding
ENST00000589638 (TMED1-007) 10833051-10836195 protein_coding
ENST00000591157 (TMED1-002) 10832985-10836249 nonsense_mediated_decay
ENST00000591695 (TMED1-006) 10832813-10836318 protein_coding
ENSG00000214212 (C19orf38)
chromosome 19 open reading frame 38 		ENST00000397820 (C19orf38-001) 10848402-10869790 protein_coding
ENST00000587494 (C19orf38-003) 10848495-10860104 retained_intron
ENST00000592854 (C19orf38-002) 10836575-10869470 protein_coding
ENSG00000267544 (AC007229.3)
 ENST00000590455 (AC007229.3-001) 10841839-10842250 processed_pseudogene
CIL_0002SD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032180-ENSMUSG00000057191 CGP 10090 9:21507380-21545333
GeneTranscriptPositionBiotype
ENSMUSG00000032180 (Tmed1)
transmembrane emp24 domain containing 1 		ENSMUST00000034698 (Tmed1-201) 21507380-21510186 protein_coding
ENSMUSG00000033335 (Dnm2)
dynamin 2 		ENSMUST00000072362 (Dnm2-004) 21424945-21507140 protein_coding
ENSMUST00000091087 (Dnm2-005) 21424971-21507126 protein_coding
ENSMUST00000115404 (Dnm2-201) 21424976-21507124 protein_coding
ENSMUST00000165766 (Dnm2-001) 21424908-21507754 protein_coding
ENSMUST00000169194 (Dnm2-007) 21425243-21491426 processed_transcript
ENSMUST00000172482 (Dnm2-008) 21425096-21506402 protein_coding
ENSMUST00000172763 (Dnm2-006) 21480319-21507759 retained_intron
ENSMUST00000172833 (Dnm2-010) 21476494-21499313 protein_coding
ENSMUST00000172873 (Dnm2-013) 21457107-21457570 processed_transcript
ENSMUST00000173299 (Dnm2-011) 21493943-21504622 retained_intron
ENSMUST00000173397 (Dnm2-003) 21424932-21507138 protein_coding
ENSMUST00000174050 (Dnm2-002) 21425244-21507754 protein_coding
ENSMUST00000174243 (Dnm2-009) 21505107-21506399 processed_transcript
ENSMUST00000174828 (Dnm2-012) 21424968-21467700 nonsense_mediated_decay
ENSMUSG00000057191 (AB124611)
cDNA sequence AB124611 		ENSMUST00000076326 (AB124611-003) 21526228-21545331 nonsense_mediated_decay
ENSMUST00000086361 (AB124611-001) 21526176-21545333 protein_coding
ENSMUST00000173769 (AB124611-002) 21526201-21545326 protein_coding
ENSMUSG00000092261 (Gm20519)
predicted gene 20519 		ENSMUST00000173684 (Gm20519-001) 21533627-21533985 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SD_0001ENSG00000079805ENST00000355667ENST00000359692ENST00000389253ENST00000408974ENST00000585892ENST00000587830ENST00000591701ENSG00000099203ENST00000214869ENST00000586835ENSG00000214212ENST00000397820ENST00000587494ENST00000592854ENSG00000267544ENST00000590455CIL_0002SD_0002ENSMUSG00000032180ENSMUST00000034698ENSMUSG00000033335ENSMUST00000072362ENSMUST00000091087ENSMUST00000115404ENSMUST00000169194ENSMUST00000172482ENSMUST00000172763ENSMUST00000173299ENSMUST00000173397ENSMUST00000174050ENSMUSG00000057191ENSMUST00000076326ENSMUST00000086361ENSMUST00000173769ENSMUSG00000092261ENSMUST00000173684
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079805 ENST00000355667 11.667±0.00 11.792±0.00 N/A N/A 8.750±0.00 19.473±0.00 N/A 12.802±10.49 11.246±0.00 20.026±0.00 N/A 22.247±10.35 24.178±3.66 16.735±1.36
ENST00000359692 11.248±0.00 16.413±0.00 N/A 4.326±3.62 14.080±0.00 8.534±0.00 8.837±7.42 27.998±0.00 6.287±0.00 16.594±0.00 42.463±0.00 9.622±4.41 17.109±0.68 12.816±0.00
ENST00000389253 21.725±0.00 28.931±0.00 N/A 14.500±13.66 9.191±0.00 5.275±0.00 25.147±0.00 29.404±0.00 3.001±0.00 27.544±0.00 N/A 12.276±0.22 16.791±1.69 16.734±3.94
ENST00000408974 N/A N/A N/A 12.401±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585892 N/A N/A 5.574±0.00 1.868±0.00 9.846±0.00 N/A 1.477±0.00 4.118±0.00 6.450±0.00 12.209±0.00 3.058±0.00 7.350±0.00 11.692±0.00 9.362±0.00
ENST00000586130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587830 N/A N/A 7.935±0.00 4.224±0.00 N/A N/A N/A N/A N/A N/A 6.632±0.00 N/A 37.998±0.00 39.561±0.00
ENST00000587991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591701 N/A N/A 12.349±0.00 N/A 12.623±0.00 30.925±0.00 N/A N/A N/A 20.287±0.00 N/A 10.417±0.00 N/A N/A
ENST00000591818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000099203 ENST00000214869 N/A N/A N/A N/A 17.711±0.00 13.202±0.00 N/A N/A 19.163±0.00 N/A 5.319±0.00 31.684±0.90 44.928±11.41 19.827±0.00
ENST00000586835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.529±0.00 N/A N/A N/A
ENST00000588259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214212 ENST00000397820 4.478±0.00 1.304±0.00 N/A 0.472±0.00 1.109±0.00 0.330±0.00 0.200±0.07 0.844±0.00 0.475±0.42 1.999±1.68 1.125±0.00 0.704±0.56 2.621±1.34 5.038±1.81
ENST00000587494 N/A N/A N/A N/A N/A 0.130±0.00 N/A 0.688±0.00 N/A N/A N/A 0.712±0.00 0.765±0.00 9.511±0.00
ENST00000592854 N/A N/A 0.185±0.00 0.616±0.01 0.791±0.00 0.377±0.18 N/A 0.262±0.00 0.159±0.00 N/A 0.132±0.00 0.442±0.00 0.404±0.00 4.723±0.08
ENSG00000267544 ENST00000590455 N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A 0.149±0.00 0.379±0.00 0.382±0.00 0.240±0.04 0.413±0.17 0.369±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032180 ENSMUST00000034698 24.847±3.02 36.981±6.07 19.141±1.11 15.706±5.90 17.661±5.86 N/A 24.541±3.27 28.297±4.06 16.844±2.24 N/A 21.091±3.08 47.099±16.80 28.992±1.27 N/A
ENSMUSG00000033335 ENSMUST00000072362 N/A N/A N/A 9.568±1.27 N/A N/A N/A 6.417±0.00 3.974±0.46 N/A N/A 7.252±1.17 15.884±9.53 18.061±4.59
ENSMUST00000091087 17.795±0.52 24.568±8.63 16.300±2.17 7.412±0.00 26.487±11.38 45.534±3.75 9.327±2.59 12.932±0.47 7.528±2.40 30.839±4.54 7.153±2.27 13.200±3.98 17.970±7.19 10.395±1.24
ENSMUST00000115404 N/A 24.045±7.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169194 N/A N/A N/A 11.785±0.00 N/A N/A N/A N/A N/A N/A N/A 14.322±3.91 78.622±19.38 N/A
ENSMUST00000172482 N/A N/A N/A N/A N/A N/A N/A N/A 5.928±0.00 N/A N/A 14.591±6.03 28.673±6.42 N/A
ENSMUST00000172763 N/A 22.988±2.85 N/A N/A 19.135±9.33 34.505±9.06 N/A 9.950±1.27 5.739±0.00 18.833±2.80 N/A 13.300±0.00 N/A N/A
ENSMUST00000172833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173299 N/A N/A N/A N/A 9.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173397 9.397±0.58 24.199±1.60 9.176±0.46 6.710±0.09 20.554±9.07 29.975±8.22 4.812±1.59 10.139±1.61 7.419±2.17 21.401±4.52 2.426±0.00 15.497±2.65 22.669±11.32 21.096±6.76
ENSMUST00000174050 N/A N/A N/A N/A N/A 31.706±7.78 3.380±0.00 N/A 4.932±0.04 N/A N/A 9.841±2.07 25.697±0.00 N/A
ENSMUST00000174243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057191 ENSMUST00000076326 N/A N/A N/A N/A N/A 0.196±0.00 0.090±0.00 N/A 0.190±0.00 N/A N/A 0.276±0.00 0.205±0.00 N/A
ENSMUST00000086361 2.588±0.95 1.531±0.39 2.261±0.09 0.346±0.02 8.658±5.33 1.011±0.15 0.505±0.28 0.691±0.16 4.591±4.32 4.326±0.33 0.569±0.50 1.679±0.65 0.623±0.11 0.217±0.03
ENSMUST00000173769 0.659±0.05 N/A 0.509±0.00 0.132±0.01 2.237±0.40 0.592±0.41 0.163±0.00 0.280±0.01 1.389±0.80 0.804±0.00 0.175±0.09 0.878±0.68 0.460±0.28 0.734±0.17
ENSMUSG00000092261 ENSMUST00000173684 0.175±0.00 N/A 0.188±0.01 0.276±0.05 0.504±0.26 N/A 0.149±0.00 0.192±0.07 0.216±0.10 N/A N/A 0.585±0.34 0.504±0.35 1.058±0.25

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