C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002S5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214212-ENSG00000142453 CGP 9606 19:10836575-10923070
GeneTranscriptPositionBiotype
ENSG00000130733 (YIPF2)
Yip1 domain family, member 2 		ENST00000253031 (YIPF2-001) 10922185-10928681 protein_coding
ENST00000585858 (YIPF2-003) 10923837-10928650 protein_coding
ENST00000586575 (YIPF2-012) 10923352-10928657 protein_coding
ENST00000586748 (YIPF2-002) 10922768-10928653 protein_coding
ENST00000587943 (YIPF2-004) 10923496-10928625 protein_coding
ENST00000588347 (YIPF2-006) 10923833-10928512 protein_coding
ENST00000588962 (YIPF2-011) 10923842-10928550 retained_intron
ENST00000589971 (YIPF2-009) 10922835-10924147 protein_coding
ENST00000590329 (YIPF2-007) 10923272-10928585 protein_coding
ENST00000591872 (YIPF2-008) 10923101-10923617 protein_coding
ENST00000592505 (YIPF2-005) 10927598-10928547 retained_intron
ENST00000592646 (YIPF2-010) 10922770-10924117 protein_coding
ENSG00000142453 (CARM1)
coactivator-associated arginine methyltransferase 1 		ENST00000327064 (CARM1-002) 10871513-10923070 protein_coding
ENST00000344150 (CARM1-003) 10871703-10922721 protein_coding
ENST00000586221 (CARM1-001) 10871828-10922777 nonsense_mediated_decay
ENST00000586298 (CARM1-010) 10919929-10921900 protein_coding
ENST00000586508 (CARM1-006) 10918986-10920870 retained_intron
ENST00000588947 (CARM1-008) 10871596-10909136 protein_coding
ENST00000589693 (CARM1-005) 10871910-10913931 nonsense_mediated_decay
ENST00000590039 (CARM1-009) 10871853-10912252 nonsense_mediated_decay
ENST00000590699 (CARM1-004) 10871673-10921771 nonsense_mediated_decay
ENST00000592516 (CARM1-007) 10920667-10921934 retained_intron
ENSG00000214212 (C19orf38)
chromosome 19 open reading frame 38 		ENST00000397820 (C19orf38-001) 10848402-10869790 protein_coding
ENST00000587494 (C19orf38-003) 10848495-10860104 retained_intron
ENST00000592854 (C19orf38-002) 10836575-10869470 protein_coding
ENSG00000267544 (AC007229.3)
 ENST00000590455 (AC007229.3-001) 10841839-10842250 processed_pseudogene
CIL_0002S5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057191-ENSMUSG00000032185 CGP 10090 9:21526176-21589487
GeneTranscriptPositionBiotype
ENSMUSG00000032182 (Yipf2)
Yip1 domain family, member 2 		ENSMUST00000034700 (Yipf2-201) 21588709-21592831 protein_coding
ENSMUST00000078572 (Yipf2-202) 21588709-21592831 protein_coding
ENSMUST00000180365 (Yipf2-203) 21588709-21592831 protein_coding
ENSMUSG00000032185 (Carm1)
coactivator-associated arginine methyltransferase 1 		ENSMUST00000034703 (Carm1-001) 21546894-21589467 protein_coding
ENSMUST00000115394 (Carm1-005) 21546923-21589467 protein_coding
ENSMUST00000115395 (Carm1-003) 21546913-21589487 protein_coding
ENSMUST00000130032 (Carm1-002) 21546978-21589467 nonsense_mediated_decay
ENSMUST00000130100 (Carm1-009) 21587403-21588129 processed_transcript
ENSMUST00000132011 (Carm1-008) 21587218-21588200 processed_transcript
ENSMUST00000139871 (Carm1-007) 21575104-21580339 processed_transcript
ENSMUST00000147749 (Carm1-006) 21547158-21579467 processed_transcript
ENSMUST00000154049 (Carm1-004) 21546923-21589467 retained_intron
ENSMUSG00000057191 (AB124611)
cDNA sequence AB124611 		ENSMUST00000076326 (AB124611-003) 21526228-21545331 nonsense_mediated_decay
ENSMUST00000086361 (AB124611-001) 21526176-21545333 protein_coding
ENSMUST00000173769 (AB124611-002) 21526201-21545326 protein_coding
ENSMUSG00000092261 (Gm20519)
predicted gene 20519 		ENSMUST00000173684 (Gm20519-001) 21533627-21533985 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S5_0001ENSG00000130733ENST00000253031ENST00000585858ENST00000586575ENST00000586748ENST00000587943ENST00000588347ENST00000588962ENST00000589971ENST00000590329ENST00000591872ENST00000592505ENST00000592646ENSG00000142453ENST00000327064ENST00000344150ENST00000586221ENST00000586298ENST00000586508ENST00000588947ENST00000589693ENST00000590039ENST00000590699ENST00000592516ENSG00000214212ENST00000397820ENST00000587494ENST00000592854ENSG00000267544ENST00000590455CIL_0002S5_0002ENSMUSG00000032182ENSMUST00000034700ENSMUST00000078572ENSMUST00000180365ENSMUSG00000032185ENSMUST00000034703ENSMUST00000115394ENSMUST00000115395ENSMUST00000130032ENSMUST00000130100ENSMUST00000132011ENSMUST00000139871ENSMUST00000147749ENSMUST00000154049ENSMUSG00000057191ENSMUST00000076326ENSMUST00000086361ENSMUST00000173769ENSMUSG00000092261ENSMUST00000173684
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S5_0001ENSG00000130733ENST00000253031ENST00000585858ENST00000586748ENST00000589971ENST00000592646ENSG00000142453ENST00000327064ENST00000344150ENST00000586221ENST00000586298ENST00000586508ENST00000590699ENSG00000214212ENST00000397820ENST00000587494ENST00000592854ENSG00000267544ENST00000590455CIL_0002S5_0002ENSMUSG00000032182ENSMUST00000034700ENSMUST00000078572ENSMUST00000180365ENSMUSG00000032185ENSMUST00000034703ENSMUST00000115395ENSMUST00000130032ENSMUST00000154049ENSMUSG00000057191ENSMUST00000076326ENSMUST00000086361ENSMUST00000173769ENSMUSG00000092261ENSMUST00000173684
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130733 ENST00000253031 25.513±0.00 24.005±0.00 1.168±0.00 9.747±5.67 12.544±10.04 11.808±9.81 5.219±4.31 29.563±0.00 10.367±7.85 13.979±10.54 17.645±14.24 22.174±12.29 52.012±16.73 40.569±0.53
ENST00000585858 N/A N/A 1.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586748 N/A N/A N/A N/A 1.543±0.00 N/A N/A 1.409±0.00 N/A N/A N/A 3.248±0.00 17.196±0.00 N/A
ENST00000587943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589971 N/A N/A N/A N/A N/A N/A N/A 2.778±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592646 N/A N/A 1.475±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000142453 ENST00000327064 N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000344150 15.730±0.00 13.474±0.00 N/A N/A 6.435±4.62 1.965±0.00 0.609±0.00 1.066±0.00 3.878±3.00 1.055±0.00 1.602±0.00 13.311±8.67 19.050±6.64 23.163±0.00
ENST00000586221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.760±0.00 N/A N/A N/A
ENST00000586298 N/A N/A N/A 7.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586508 N/A N/A N/A N/A N/A N/A N/A 2.870±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590699 N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A 4.641±0.00 N/A N/A N/A
ENST00000592516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214212 ENST00000397820 4.478±0.00 1.304±0.00 N/A 0.472±0.00 1.109±0.00 0.330±0.00 0.200±0.07 0.844±0.00 0.475±0.42 1.999±1.68 1.125±0.00 0.704±0.56 2.621±1.34 5.038±1.81
ENST00000587494 N/A N/A N/A N/A N/A 0.130±0.00 N/A 0.688±0.00 N/A N/A N/A 0.712±0.00 0.765±0.00 9.511±0.00
ENST00000592854 N/A N/A 0.185±0.00 0.616±0.01 0.791±0.00 0.377±0.18 N/A 0.262±0.00 0.159±0.00 N/A 0.132±0.00 0.442±0.00 0.404±0.00 4.723±0.08
ENSG00000267544 ENST00000590455 N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A 0.149±0.00 0.379±0.00 0.382±0.00 0.240±0.04 0.413±0.17 0.369±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032182 ENSMUST00000034700 N/A N/A 10.801±0.00 N/A N/A N/A N/A 13.674±0.55 7.139±0.26 N/A N/A N/A 13.748±3.11 N/A
ENSMUST00000078572 20.035±2.95 45.828±2.53 16.391±1.78 N/A 21.789±2.33 28.780±3.51 N/A 18.704±2.46 15.672±4.36 26.754±3.22 13.409±0.00 32.062±11.21 21.964±5.01 N/A
ENSMUST00000180365 N/A N/A N/A N/A N/A 18.907±2.89 N/A N/A N/A N/A N/A 15.969±3.81 9.961±0.00 N/A
ENSMUSG00000032185 ENSMUST00000034703 25.478±5.21 21.153±4.77 8.764±1.77 16.731±8.16 19.031±5.25 11.202±2.78 17.230±3.45 10.452±0.46 10.010±4.45 11.372±2.39 17.359±3.50 17.596±6.22 15.464±5.32 35.054±15.49
ENSMUST00000115394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115395 10.137±0.00 N/A N/A N/A 8.133±0.11 8.871±1.58 N/A N/A N/A 8.213±0.00 N/A 13.766±1.90 11.979±4.37 N/A
ENSMUST00000130032 N/A 18.259±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.445±0.00 N/A 31.954±0.63
ENSMUST00000130100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154049 8.437±0.00 N/A N/A N/A 8.638±0.42 6.262±0.16 N/A N/A N/A 6.829±0.37 N/A 14.810±3.58 N/A N/A
ENSMUSG00000057191 ENSMUST00000076326 N/A N/A N/A N/A N/A 0.196±0.00 0.090±0.00 N/A 0.190±0.00 N/A N/A 0.276±0.00 0.205±0.00 N/A
ENSMUST00000086361 2.588±0.95 1.531±0.39 2.261±0.09 0.346±0.02 8.658±5.33 1.011±0.15 0.505±0.28 0.691±0.16 4.591±4.32 4.326±0.33 0.569±0.50 1.679±0.65 0.623±0.11 0.217±0.03
ENSMUST00000173769 0.659±0.05 N/A 0.509±0.00 0.132±0.01 2.237±0.40 0.592±0.41 0.163±0.00 0.280±0.01 1.389±0.80 0.804±0.00 0.175±0.09 0.878±0.68 0.460±0.28 0.734±0.17
ENSMUSG00000092261 ENSMUST00000173684 0.175±0.00 N/A 0.188±0.01 0.276±0.05 0.504±0.26 N/A 0.149±0.00 0.192±0.07 0.216±0.10 N/A N/A 0.585±0.34 0.504±0.35 1.058±0.25

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