C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: desmocollin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059898 Dsc3 10090 - 18:19960930-20002097 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115848 Dsc3-201 19960930-20002097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115848
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115848 0.015±0.01 0.008±0.01 0.195±0.06 2.151±0.40 0.045±0.03 0.007±0.00 0.229±0.13 0.022±0.02 1.183±0.83 0.199±0.10 0.038±0.02 0.107±0.10 0.014±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EO CIL_0006EO_0002 CGP 18:16588877-20002097
CIL_0006EN CIL_0006EN_0002 CGP 18:19960930-20059554

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005509 IEA calcium ion binding
GO:0005576 IDA extracellular region
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0030057 IDA desmosome
GO:0045295 IEA gamma-catenin binding
GO:0050821 IEA protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039677 dsc2l desmocollin 2 like protein_coding Danio_rerio
ENSG00000134762 DSC3 desmocollin 3 protein_coding Homo_sapiens

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