C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: desmocollin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134762 DSC3 9606 - 18:30990008-31042815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360428 DSC3-001 30990008-31042741 protein_coding
  ENST00000434452 DSC3-201 30990086-31042815 protein_coding
  ENST00000584980 DSC3-002 30994126-31006918 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360428ENST00000434452ENST00000584980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360428 N/A N/A N/A 0.015±0.00 0.966±0.22 0.253±0.00 0.057±0.04 0.046±0.00 N/A N/A 0.003±0.00 0.893±0.56 3.930±1.19 0.121±0.00
ENST00000434452 0.466±0.00 0.037±0.00 0.032±0.00 0.024±0.00 0.520±0.25 N/A 0.019±0.00 0.073±0.05 0.402±0.39 0.259±0.02 0.002±0.00 1.045±0.63 3.318±2.18 0.292±0.26
ENST00000584980 N/A N/A 0.079±0.00 N/A N/A 0.303±0.00 0.049±0.00 0.232±0.00 N/A 0.245±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006EO CIL_0006EO_0001 CGP 18:27950966-31042815
CIL_0006EN CIL_0006EN_0001 CGP 18:30990008-31102415

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 TAS cell-cell junction
GO:0007155 TAS cell adhesion
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030057 IEA desmosome
GO:0045295 IPI gamma-catenin binding
GO:0050821 IDA protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039677 dsc2l desmocollin 2 like protein_coding Danio_rerio
ENSMUSG00000059898 Dsc3 desmocollin 3 protein_coding Mus_musculus

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