C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: scratch homolog 2, zinc finger protein (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060257 Scrt2 10090 + 2:152081529-152095802 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064061 Scrt2-001 152081529-152095802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000064061
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000064061 0.007±0.00 0.080±0.06 0.011±0.00 19.885±12.41 0.031±0.02 0.008±0.00 0.021±0.01 0.027±0.04 0.008±0.00 0.027±0.01 0.005±0.00 0.120±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PI CIL_0000PI_0002 CGP 2:151996511-152095802
CIL_0000NP CIL_0000NP_0002 CGP 2:152081529-152111376

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:2001222 IMP regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056175 scrt2 scratch homolog 2, zinc finger protein (Drosophila) protein_coding Danio_rerio
ENSG00000215397 SCRT2 scratch family zinc finger 2 protein_coding Homo_sapiens

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