C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000NP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056175-ENSDARG00000079160 CGP 7955 8:29375632-29398800
GeneTranscriptPositionBiotype
ENSDARG00000056175 (scrt2)
scratch homolog 2, zinc finger protein (Drosophila) 		ENSDART00000053782 (scrt2-201) 29375632-29382076 protein_coding
ENSDARG00000079160 (srxn1)
sulfiredoxin 1 homolog (S. cerevisiae) 		ENSDART00000110291 (srxn1-201) 29395592-29398800 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000NP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060257-ENSMUSG00000032802 CGP 10090 2:152081529-152111376
GeneTranscriptPositionBiotype
ENSMUSG00000032802 (Srxn1)
sulfiredoxin 1 homolog (S. cerevisiae) 		ENSMUST00000041500 (Srxn1-001) 152105524-152111376 protein_coding
ENSMUST00000128882 (Srxn1-003) 152105516-152109322 processed_transcript
ENSMUST00000137751 (Srxn1-002) 152105516-152109211 processed_transcript
ENSMUSG00000060257 (Scrt2)
scratch homolog 2, zinc finger protein (Drosophila) 		ENSMUST00000064061 (Scrt2-001) 152081529-152095802 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NP_0001ENSDARG00000056175ENSDART00000053782ENSDARG00000079160ENSDART00000110291CIL_0000NP_0002ENSMUSG00000032802ENSMUST00000041500ENSMUST00000128882ENSMUST00000137751ENSMUSG00000060257ENSMUST00000064061
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NP_0001ENSDARG00000056175ENSDART00000053782ENSDARG00000079160ENSDART00000110291CIL_0000NP_0002ENSMUSG00000032802ENSMUST00000041500ENSMUST00000128882ENSMUSG00000060257ENSMUST00000064061
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056175 ENSDART00000053782 N/A N/A N/A N/A N/A N/A 0.023±0.00 0.074±0.00 N/A N/A 0.289±0.00 N/A N/A N/A
ENSDARG00000079160 ENSDART00000110291 N/A N/A N/A 1.602±0.48 N/A N/A 1.077±0.22 0.877±0.08 0.178±0.00 N/A 0.372±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032802 ENSMUST00000041500 13.954±2.58 130.732±49.51 14.111±0.36 5.635±3.45 9.658±3.59 49.549±8.06 4.670±1.22 21.324±1.99 12.434±5.78 10.828±0.56 4.387±1.14 26.109±12.35 6.042±5.78 5.558±3.87
ENSMUST00000128882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.520±0.41
ENSMUST00000137751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060257 ENSMUST00000064061 0.007±0.00 0.080±0.06 0.011±0.00 19.885±12.41 N/A 0.031±0.02 0.008±0.00 0.021±0.01 0.027±0.04 0.008±0.00 N/A 0.027±0.01 0.005±0.00 0.120±0.05

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