C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042737-ENSDARG00000056175 CGP 7955 8:29321021-29382076
GeneTranscriptPositionBiotype
ENSDARG00000042737 (slc52a3)
solute carrier family 52, riboflavin transporter, member 3 		ENSDART00000062716 (slc52a3-201) 29321021-29329625 protein_coding
ENSDARG00000056175 (scrt2)
scratch homolog 2, zinc finger protein (Drosophila) 		ENSDART00000053782 (scrt2-201) 29375632-29382076 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000PI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027463-ENSMUSG00000060257 CGP 10090 2:151996511-152095802
GeneTranscriptPositionBiotype
ENSMUSG00000027463 (Slc52a3)
solute carrier protein family 52, member 3 		ENSMUST00000073228 (Slc52a3-001) 151996535-152009258 protein_coding
ENSMUST00000109858 (Slc52a3-003) 151999897-152009246 protein_coding
ENSMUST00000109859 (Slc52a3-201) 151996511-152009257 protein_coding
ENSMUST00000109861 (Slc52a3-002) 151999865-152009222 protein_coding
ENSMUSG00000060257 (Scrt2)
scratch homolog 2, zinc finger protein (Drosophila) 		ENSMUST00000064061 (Scrt2-001) 152081529-152095802 protein_coding
ENSMUSG00000085946 (AA387200)
expressed sequence AA387200 		ENSMUST00000147463 (AA387200-001) 152074855-152076808 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PI_0001ENSDARG00000042737ENSDART00000062716ENSDARG00000056175ENSDART00000053782CIL_0000PI_0002ENSMUSG00000027463ENSMUST00000073228ENSMUST00000109858ENSMUST00000109859ENSMUST00000109861ENSMUSG00000060257ENSMUST00000064061ENSMUSG00000085946ENSMUST00000147463
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PI_0001ENSDARG00000042737ENSDART00000062716ENSDARG00000056175ENSDART00000053782CIL_0000PI_0002ENSMUSG00000027463ENSMUST00000073228ENSMUST00000109858ENSMUST00000109859ENSMUST00000109861ENSMUSG00000060257ENSMUST00000064061ENSMUSG00000085946ENSMUST00000147463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042737 ENSDART00000062716 N/A N/A N/A 0.184±0.13 N/A N/A 3.936±2.42 15.059±8.34 0.438±0.00 N/A 7.042±0.00 N/A N/A N/A
ENSDARG00000056175 ENSDART00000053782 N/A N/A N/A N/A N/A N/A 0.023±0.00 0.074±0.00 N/A N/A 0.289±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027463 ENSMUST00000073228 2.956±1.11 1.809±0.68 5.545±0.79 0.274±0.10 3.136±0.73 24.350±3.15 0.584±0.20 3.410±0.63 0.318±0.25 8.043±2.44 0.312±0.11 2.899±1.30 10.190±11.63 N/A
ENSMUST00000109858 N/A N/A N/A N/A 0.749±0.21 N/A 0.221±0.00 N/A 0.028±0.00 N/A 0.105±0.00 1.441±0.69 4.623±2.82 0.877±0.00
ENSMUST00000109859 0.770±0.25 0.428±0.00 N/A N/A 1.018±0.00 4.845±0.00 0.164±0.00 1.046±0.00 0.157±0.08 2.120±0.30 0.279±0.10 N/A 1.047±0.00 N/A
ENSMUST00000109861 2.269±1.03 N/A 10.667±0.28 0.133±0.05 1.208±0.71 3.339±0.00 0.316±0.09 3.869±0.94 0.063±0.03 6.791±1.81 0.186±0.00 4.542±1.84 1.864±0.22 15.037±7.72
ENSMUSG00000060257 ENSMUST00000064061 0.007±0.00 0.080±0.06 0.011±0.00 19.885±12.41 N/A 0.031±0.02 0.008±0.00 0.021±0.01 0.027±0.04 0.008±0.00 N/A 0.027±0.01 0.005±0.00 0.120±0.05
ENSMUSG00000085946 ENSMUST00000147463 N/A N/A N/A 1.889±0.56 N/A N/A N/A 0.046±0.01 N/A N/A N/A N/A 0.005±0.00 0.027±0.00

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