C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060424 Pou3f3os 10090 - 1:42590782-42694842 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078844 Pou3f3os-201 42648378-42666912 lincRNA
  ENSMUST00000176052 Pou3f3os-001 42648201-42667672 lincRNA
  ENSMUST00000176154 Pou3f3os-011 42648199-42666991 lincRNA
  ENSMUST00000176977 Pou3f3os-003 42648200-42651679 lincRNA
  ENSMUST00000177136 Pou3f3os-004 42693027-42694825 lincRNA
  ENSMUST00000180689 Pou3f3os-006 42648200-42694825 lincRNA
  ENSMUST00000181593 Pou3f3os-007 42648200-42693153 lincRNA
  ENSMUST00000181660 Pou3f3os-005 42590782-42694808 lincRNA
  ENSMUST00000181725 Pou3f3os-008 42648193-42693128 lincRNA
  ENSMUST00000185599 Pou3f3os-009 42666852-42694842 lincRNA
  ENSMUST00000186656 Pou3f3os-002 42648201-42693093 lincRNA
  ENSMUST00000188153 Pou3f3os-010 42648200-42694825 lincRNA

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000078844ENSMUST00000176052ENSMUST00000176977ENSMUST00000177136ENSMUST00000180689ENSMUST00000181593ENSMUST00000181660ENSMUST00000181725ENSMUST00000185599ENSMUST00000186656ENSMUST00000188153
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000078844 N/A 293.503±0.00 N/A N/A N/A N/A 2.050±0.00 N/A 3.360±0.00
ENSMUST00000176052 N/A 19.191±0.00 0.293±0.00 N/A 0.005±0.00 0.076±0.00 0.401±0.33 N/A N/A
ENSMUST00000176977 N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A 0.605±0.22
ENSMUST00000177136 N/A N/A N/A 0.456±0.06 N/A N/A N/A N/A 0.102±0.03
ENSMUST00000180689 0.074±0.00 11.518±1.93 N/A 4.672±0.80 N/A 0.161±0.00 N/A N/A N/A
ENSMUST00000181593 N/A 10.024±2.97 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181660 N/A N/A 0.035±0.00 N/A 0.003±0.00 N/A N/A 0.003±0.00 0.031±0.01
ENSMUST00000181725 N/A 19.056±6.33 N/A N/A 0.282±0.00 N/A N/A 0.023±0.00 N/A
ENSMUST00000185599 0.047±0.00 N/A N/A 2.703±0.85 N/A N/A N/A 0.030±0.00 N/A
ENSMUST00000186656 N/A N/A 0.207±0.00 N/A 0.027±0.00 N/A N/A N/A N/A
ENSMUST00000188153 0.059±0.03 28.262±12.24 0.249±0.00 3.585±1.53 0.082±0.07 0.064±0.00 0.219±0.14 0.041±0.00 0.543±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IW CIL_0004IW_0003 CGP 1:40805601-42703176
CIL_0007JQ CIL_0007JQ_0002 UCNEbase 1:40943211-42889148
CIL_0007T8 CIL_0007T8_0002 VISTA 1:42065768-42666767
CIL_0007ZQ CIL_0007ZQ_0002 VISTA 1:42123141-42724011
CIL_0008TY CIL_0008TY_0002 VISTA 1:42171587-42773853
CIL_0008JA CIL_0008JA_0002 VISTA 1:42221380-42823862
CIL_0008IN CIL_0008IN_0002 VISTA 1:42238719-42841030
CIL_0008O2 CIL_0008O2_0002 VISTA 1:42378245-42979419
CIL_0008KZ CIL_0008KZ_0002 VISTA 1:42390175-42992711
CIL_000902 CIL_000902_0002 VISTA 1:42440655-43042396
CIL_00096O CIL_00096O_0002 VISTA 1:42588323-43189246

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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