C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060441 Trim5 10090 - 7:104263386-104288094 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051795 Trim5-201 104265367-104279732 protein_coding
  ENSMUST00000098179 Trim5-001 104263386-104288094 protein_coding
  ENSMUST00000138557 Trim5-002 104263386-104279788 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051795ENSMUST00000098179ENSMUST00000138557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051795 N/A 0.155±0.00 N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A 0.644±0.12 N/A 0.086±0.07
ENSMUST00000098179 0.440±0.12 0.605±0.00 1.063±0.09 0.060±0.00 1.074±0.32 0.461±0.00 0.108±0.00 0.221±0.10 0.388±0.18 1.054±0.14 0.212±0.00 0.708±0.29 0.166±0.04 N/A
ENSMUST00000138557 0.234±0.07 0.993±0.45 N/A 0.031±0.02 1.213±0.04 0.268±0.06 0.123±0.07 0.203±0.10 0.253±0.13 0.511±0.25 0.146±0.04 0.473±0.25 0.123±0.11 0.100±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132256 TRIM5 tripartite motif containing 5 protein_coding Homo_sapiens

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