C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138557 Trim5-002 ENSMUSG00000060441 10090 - 7:104263386-104279788 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000138557
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138557 0.234±0.07 0.993±0.45 0.031±0.02 1.213±0.04 0.268±0.06 0.123±0.07 0.203±0.10 0.253±0.13 0.511±0.25 0.146±0.04 0.473±0.25 0.123±0.11 0.100±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379965 TRIM22-001 protein_coding Homo_sapiens 0.00005 55
ENST00000480395 TRIM22-002 retained_intron Homo_sapiens 0.00004 55
ENST00000493494 TRIM22-009 retained_intron Homo_sapiens 0.000008 55

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