C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exostoses (multiple) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061731 Ext1 10090 - 15:53064038-53346159 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077273 Ext1-001 53064038-53346159 protein_coding
  ENSMUST00000110244 Ext1-002 53083146-53196255 protein_coding
  ENSMUST00000133362 Ext1-004 53068664-53345659 nonsense_mediated_decay
  ENSMUST00000140798 Ext1-003 53089931-53107868 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077273ENSMUST00000110244ENSMUST00000133362
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077273 5.304±0.21 2.868±0.48 3.065±1.14 1.280±0.14 3.520±0.98 2.900±0.10 2.050±0.37 3.360±1.13 2.045±1.01 4.597±0.63 0.620±0.07 7.953±1.24 3.051±1.82 0.544±0.43
ENSMUST00000110244 N/A 6.506±1.12 N/A N/A N/A 5.506±0.91 N/A N/A N/A N/A N/A 18.587±1.69 N/A 1.673±0.14
ENSMUST00000133362 N/A 3.534±1.23 10.180±0.00 4.141±0.94 10.639±3.41 4.796±1.35 3.712±1.73 4.946±0.00 4.398±1.91 6.731±1.78 1.837±0.33 28.587±7.13 12.710±5.37 1.977±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RJ CIL_0005RJ_0002 CGP 15:52712445-53346159
CIL_0005RK CIL_0005RK_0002 CGP 15:53064038-53902537

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006024 IEA glycosaminoglycan biosynthetic process
GO:0006486 IEA protein glycosylation
GO:0007369 IMP gastrulation
GO:0007411 IGI axon guidance
GO:0007420 IMP brain development
GO:0007492 IMP endoderm development
GO:0007498 IMP mesoderm development
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0015012 IDA heparan sulfate proteoglycan biosynthetic process
GO:0015014 IEA heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015020 IEA glucuronosyltransferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0021772 IMP olfactory bulb development
GO:0030176 IDA integral component of endoplasmic reticulum membrane
GO:0031227 IEA intrinsic component of endoplasmic reticulum membrane
GO:0033692 IEA cellular polysaccharide biosynthetic process
GO:0042803 IEA protein homodimerization activity
GO:0046982 IEA protein heterodimerization activity
GO:0050508 IDA glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0050509 IDA N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity
GO:0072498 IMP embryonic skeletal joint development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020373 ext1a exostoses (multiple) 1a protein_coding Danio_rerio
ENSDARG00000089168 EXT1 (2 of 2) exostosin glycosyltransferase 1 protein_coding Danio_rerio
ENSG00000182197 EXT1 exostosin glycosyltransferase 1 protein_coding Homo_sapiens

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