C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005RK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182197-ENSG00000177570 CGP 9606 8:117794490-118621995
GeneTranscriptPositionBiotype
ENSG00000177570 (SAMD12)
sterile alpha motif domain containing 12 		ENST00000314727 (SAMD12-001) 118377988-118621953 protein_coding
ENST00000409003 (SAMD12-201) 118189459-118621945 protein_coding
ENST00000445741 (SAMD12-005) 118239866-118621893 nonsense_mediated_decay
ENST00000453675 (SAMD12-006) 118196173-118580895 protein_coding
ENST00000524796 (SAMD12-003) 118197547-118580882 protein_coding
ENST00000526328 (SAMD12-002) 118379560-118621945 protein_coding
ENST00000526765 (SAMD12-004) 118379560-118621995 protein_coding
ENST00000527515 (SAMD12-007) 118375701-118379605 processed_transcript
ENSG00000182197 (EXT1)
exostosin glycosyltransferase 1 		ENST00000378204 (EXT1-001) 117794490-118111853 protein_coding
ENST00000436216 (EXT1-003) 117830237-118110414 protein_coding
ENST00000437196 (EXT1-004) 117799820-118111342 nonsense_mediated_decay
ENSG00000225885 (AC023590.1)
 ENST00000366457 (AC023590.1-002) 118282242-118284963 antisense
ENST00000420844 (AC023590.1-004) 118282139-118295693 antisense
ENST00000430457 (AC023590.1-005) 118291208-118400605 antisense
ENST00000434023 (AC023590.1-003) 118284296-118295694 antisense
ENST00000449065 (AC023590.1-001) 118282261-118288356 antisense
ENSG00000279535 (SAMD12)
sterile alpha motif domain containing 12 		ENST00000623984 (SAMD12-001) 118189455-118189970 TEC
CIL_0005RK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061731-ENSMUSG00000058656 CGP 10090 15:53064038-53902537
GeneTranscriptPositionBiotype
ENSMUSG00000058656 (Samd12)
sterile alpha motif domain containing 12 		ENSMUST00000078673 (Samd12-001) 53461801-53902530 protein_coding
ENSMUST00000132059 (Samd12-004) 53462194-53902381 nonsense_mediated_decay
ENSMUST00000132362 (Samd12-003) 53818794-53902537 processed_transcript
ENSMUST00000154119 (Samd12-002) 53461621-53902537 processed_transcript
ENSMUSG00000061731 (Ext1)
exostoses (multiple) 1 		ENSMUST00000077273 (Ext1-001) 53064038-53346159 protein_coding
ENSMUST00000110244 (Ext1-002) 53083146-53196255 protein_coding
ENSMUST00000133362 (Ext1-004) 53068664-53345659 nonsense_mediated_decay
ENSMUST00000140798 (Ext1-003) 53089931-53107868 retained_intron
ENSMUSG00000072584 (Gm7489)
predicted gene 7489 		ENSMUST00000100666 (Gm7489-001) 53884906-53886597 protein_coding
ENSMUSG00000077567 (Gm23200)
predicted gene, 23200 		ENSMUST00000104379 (Gm23200-201) 53613067-53613198 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RK_0001ENSG00000177570ENST00000314727ENST00000409003ENST00000445741ENST00000453675ENST00000524796ENST00000526328ENST00000526765ENST00000527515ENSG00000182197ENST00000378204ENST00000436216ENST00000437196ENSG00000225885ENST00000366457ENST00000420844ENST00000430457ENST00000434023ENST00000449065ENSG00000279535ENST00000623984CIL_0005RK_0002ENSMUSG00000058656ENSMUST00000078673ENSMUST00000132059ENSMUST00000132362ENSMUST00000154119ENSMUSG00000061731ENSMUST00000077273ENSMUST00000110244ENSMUST00000133362ENSMUST00000140798ENSMUSG00000072584ENSMUST00000100666ENSMUSG00000077567ENSMUST00000104379
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RK_0001ENSG00000177570ENST00000314727ENST00000409003ENST00000453675ENST00000524796ENST00000526328ENSG00000182197ENST00000378204ENST00000436216ENST00000437196ENSG00000225885ENST00000366457ENST00000420844ENST00000430457ENST00000434023ENST00000449065ENSG00000279535ENST00000623984CIL_0005RK_0002ENSMUSG00000058656ENSMUST00000078673ENSMUST00000132059ENSMUST00000132362ENSMUST00000154119ENSMUSG00000061731ENSMUST00000077273ENSMUST00000110244ENSMUST00000133362ENSMUSG00000072584ENSMUST00000100666ENSMUSG00000077567ENSMUST00000104379
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177570 ENST00000314727 N/A N/A 1.669±0.00 N/A N/A N/A 0.631±0.00 N/A N/A N/A N/A 2.814±0.00 N/A N/A
ENST00000409003 N/A 0.550±0.00 0.829±0.00 5.896±1.07 1.503±0.00 0.889±0.67 0.673±0.18 2.140±0.00 1.195±0.00 2.408±0.00 0.042±0.00 1.123±0.51 0.008±0.00 0.663±0.13
ENST00000445741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.251±0.00 0.017±0.00 N/A
ENST00000524796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A
ENST00000526328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.138±0.00 N/A N/A
ENST00000526765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182197 ENST00000378204 1.866±0.00 1.981±0.00 0.488±0.00 0.565±0.22 2.773±0.00 1.575±0.00 0.684±0.40 1.646±0.09 1.997±1.54 2.340±1.35 0.176±0.09 2.071±1.03 2.894±1.03 1.965±1.38
ENST00000436216 N/A N/A N/A 1.656±0.00 N/A 5.391±0.00 N/A 5.751±0.00 3.567±0.00 13.928±0.00 N/A 5.940±0.00 13.563±0.00 N/A
ENST00000437196 7.758±0.00 8.219±0.00 1.132±0.00 1.859±1.04 13.075±0.00 8.650±2.05 4.161±0.00 5.590±2.96 10.075±7.27 10.841±7.18 1.557±0.18 6.906±4.20 16.215±2.22 8.082±3.64
ENSG00000225885 ENST00000366457 0.127±0.00 0.347±0.00 0.142±0.00 0.230±0.04 0.234±0.00 0.629±0.46 0.074±0.01 0.283±0.14 0.101±0.05 1.138±0.93 0.063±0.00 0.081±0.02 N/A 0.055±0.01
ENST00000420844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A
ENST00000430457 N/A 0.087±0.00 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.01 N/A 0.043±0.00
ENST00000434023 N/A N/A 0.662±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449065 N/A N/A N/A N/A N/A N/A N/A N/A 1.415±0.00 N/A N/A N/A N/A N/A
ENSG00000279535 ENST00000623984 N/A N/A N/A N/A 1.042±0.00 0.733±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000058656 ENSMUST00000078673 0.768±0.28 0.303±0.05 N/A N/A 0.202±0.10 1.179±0.58 0.356±0.20 0.431±0.13 0.051±0.05 1.085±0.00 0.112±0.01 1.288±0.42 0.216±0.14 0.055±0.02
ENSMUST00000132059 N/A 0.622±0.00 N/A 12.027±0.00 N/A N/A N/A N/A 0.024±0.00 N/A 0.240±0.00 1.807±0.12 2.291±0.16 0.156±0.00
ENSMUST00000132362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A
ENSMUST00000154119 0.558±0.00 N/A N/A N/A 0.094±0.00 0.418±0.11 N/A N/A 0.013±0.00 N/A 0.094±0.03 0.477±0.04 0.238±0.11 0.030±0.00
ENSMUSG00000061731 ENSMUST00000077273 5.304±0.21 2.868±0.48 3.065±1.14 1.280±0.14 3.520±0.98 2.900±0.10 2.050±0.37 3.360±1.13 2.045±1.01 4.597±0.63 0.620±0.07 7.953±1.24 3.051±1.82 0.544±0.43
ENSMUST00000110244 N/A 6.506±1.12 N/A N/A N/A 5.506±0.91 N/A N/A N/A N/A N/A 18.587±1.69 N/A 1.673±0.14
ENSMUST00000133362 N/A 3.534±1.23 10.180±0.00 4.141±0.94 10.639±3.41 4.796±1.35 3.712±1.73 4.946±0.00 4.398±1.91 6.731±1.78 1.837±0.33 28.587±7.13 12.710±5.37 1.977±0.32
ENSMUST00000140798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000072584 ENSMUST00000100666 N/A N/A 0.016±0.00 N/A N/A 0.108±0.00 0.046±0.02 0.055±0.01 N/A N/A 0.025±0.00 0.032±0.01 0.009±0.00 0.217±0.11
ENSMUSG00000077567 ENSMUST00000104379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.614±0.00 N/A N/A

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