C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005RJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164758-ENSG00000182197 CGP 9606 8:117520713-118111853
GeneTranscriptPositionBiotype
ENSG00000164758 (MED30)
mediator complex subunit 30
ENST00000297347 (MED30-001) 117520713-117540262 protein_coding
ENST00000519391 (MED30-004) 117530364-117540002 retained_intron
ENST00000519879 (MED30-003) 117520764-117528905 retained_intron
ENST00000522839 (MED30-002) 117520833-117539978 protein_coding
ENSG00000182197 (EXT1)
exostosin glycosyltransferase 1
ENST00000378204 (EXT1-001) 117794490-118111853 protein_coding
ENST00000436216 (EXT1-003) 117830237-118110414 protein_coding
ENST00000437196 (EXT1-004) 117799820-118111342 nonsense_mediated_decay
ENSG00000239917 (RPS10P16)
ribosomal protein S10 pseudogene 16
ENST00000483812 (RPS10P16-001) 117523271-117524061 unprocessed_pseudogene
CIL_0005RJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038622-ENSMUSG00000061731 CGP 10090 15:52712445-53346159
GeneTranscriptPositionBiotype
ENSMUSG00000038622 (Med30)
mediator complex subunit 30
ENSMUST00000037115 (Med30-201) 52712445-52730431 protein_coding
ENSMUSG00000061731 (Ext1)
exostoses (multiple) 1
ENSMUST00000077273 (Ext1-001) 53064038-53346159 protein_coding
ENSMUST00000110244 (Ext1-002) 53083146-53196255 protein_coding
ENSMUST00000133362 (Ext1-004) 53068664-53345659 nonsense_mediated_decay
ENSMUST00000140798 (Ext1-003) 53089931-53107868 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RJ_0001ENSG00000164758ENST00000297347ENST00000519391ENST00000519879ENST00000522839ENSG00000182197ENST00000378204ENST00000436216ENST00000437196ENSG00000239917ENST00000483812CIL_0005RJ_0002ENSMUSG00000038622ENSMUST00000037115ENSMUSG00000061731ENSMUST00000077273ENSMUST00000110244ENSMUST00000133362ENSMUST00000140798
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005RJ_0001ENSG00000164758ENST00000297347ENST00000519391ENST00000519879ENST00000522839ENSG00000182197ENST00000378204ENST00000436216ENST00000437196ENSG00000239917ENST00000483812CIL_0005RJ_0002ENSMUSG00000038622ENSMUST00000037115ENSMUSG00000061731ENSMUST00000077273ENSMUST00000110244ENSMUST00000133362
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164758 ENST00000297347 5.056±0.00 6.270±0.00 0.213±0.00 2.590±1.74 3.025±0.62 3.766±2.77 1.511±0.66 2.355±1.59 2.316±0.17 4.477±0.00 1.659±0.00 9.870±3.81 5.087±1.40 7.258±4.38
ENST00000519391 N/A N/A 0.301±0.00 N/A N/A N/A N/A N/A N/A 0.907±0.00 N/A N/A N/A N/A
ENST00000519879 N/A N/A N/A N/A N/A 0.819±0.00 0.683±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000522839 N/A N/A 0.307±0.00 N/A N/A N/A 1.246±0.00 N/A 1.505±0.00 4.876±0.00 N/A N/A N/A N/A
ENSG00000182197 ENST00000378204 1.866±0.00 1.981±0.00 0.488±0.00 0.565±0.22 2.773±0.00 1.575±0.00 0.684±0.40 1.646±0.09 1.997±1.54 2.340±1.35 0.176±0.09 2.071±1.03 2.894±1.03 1.965±1.38
ENST00000436216 N/A N/A N/A 1.656±0.00 N/A 5.391±0.00 N/A 5.751±0.00 3.567±0.00 13.928±0.00 N/A 5.940±0.00 13.563±0.00 N/A
ENST00000437196 7.758±0.00 8.219±0.00 1.132±0.00 1.859±1.04 13.075±0.00 8.650±2.05 4.161±0.00 5.590±2.96 10.075±7.27 10.841±7.18 1.557±0.18 6.906±4.20 16.215±2.22 8.082±3.64
ENSG00000239917 ENST00000483812 0.222±0.00 0.317±0.00 N/A 0.130±0.00 0.084±0.00 0.152±0.00 0.065±0.03 0.041±0.00 0.036±0.00 0.078±0.00 0.069±0.00 0.075±0.03 0.203±0.04 0.036±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038622 ENSMUST00000037115 20.830±2.92 259.300±44.57 23.839±3.62 28.241±6.59 31.783±18.12 37.329±6.90 9.162±2.55 20.175±1.94 19.806±9.05 38.294±7.67 8.237±1.38 68.392±28.15 24.663±14.96 17.701±4.70
ENSMUSG00000061731 ENSMUST00000077273 5.304±0.21 2.868±0.48 3.065±1.14 1.280±0.14 3.520±0.98 2.900±0.10 2.050±0.37 3.360±1.13 2.045±1.01 4.597±0.63 0.620±0.07 7.953±1.24 3.051±1.82 0.544±0.43
ENSMUST00000110244 N/A 6.506±1.12 N/A N/A N/A 5.506±0.91 N/A N/A N/A N/A N/A 18.587±1.69 N/A 1.673±0.14
ENSMUST00000133362 N/A 3.534±1.23 10.180±0.00 4.141±0.94 10.639±3.41 4.796±1.35 3.712±1.73 4.946±0.00 4.398±1.91 6.731±1.78 1.837±0.33 28.587±7.13 12.710±5.37 1.977±0.32
ENSMUST00000140798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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