C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062040 Zfp27 10090 - 7:29893333-29906572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053521 Zfp27-003 29893716-29906104 protein_coding
  ENSMUST00000159920 Zfp27-002 29893716-29906532 protein_coding
  ENSMUST00000160411 Zfp27-005 29900237-29906060 processed_transcript
  ENSMUST00000161904 Zfp27-004 29893715-29900488 protein_coding
  ENSMUST00000162592 Zfp27-001 29893333-29906572 protein_coding
  ENSMUST00000172448 Zfp27-201 29894079-29898863 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053521ENSMUST00000159920ENSMUST00000161904ENSMUST00000162592ENSMUST00000172448
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053521 1.357±0.37 0.795±0.27 0.990±0.46 2.247±1.03 0.947±0.39 0.642±0.05 1.670±0.27 0.920±0.15 0.653±0.26 0.915±0.16 1.245±0.52 1.479±0.41 1.213±0.64 0.622±0.20
ENSMUST00000159920 0.275±0.00 0.305±0.00 N/A 1.115±0.00 0.223±0.06 N/A N/A N/A 0.189±0.03 0.245±0.00 N/A 0.356±0.10 N/A N/A
ENSMUST00000161904 N/A N/A N/A 0.963±0.09 N/A N/A N/A N/A 0.216±0.03 N/A N/A 0.534±0.00 0.351±0.00 0.088±0.00
ENSMUST00000162592 0.840±0.19 0.232±0.09 0.485±0.11 1.547±0.31 0.253±0.09 0.184±0.01 0.315±0.03 0.253±0.07 0.238±0.11 0.336±0.12 0.473±0.11 0.648±0.32 0.372±0.08 0.144±0.05
ENSMUST00000172448 N/A 0.285±0.00 0.595±0.00 1.490±0.00 0.196±0.00 0.522±0.21 N/A 0.341±0.05 0.382±0.13 N/A 0.727±0.20 1.087±0.65 0.940±0.19 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WQ CIL_0004WQ_0004 CGP 7:29859979-29906572
CIL_0006DU CIL_0006DU_0002 CGP 7:29893333-29916813

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074922 zgc:174649 zgc:174649 protein_coding Danio_rerio
ENSDARG00000075470 zgc:110238 zgc:110238 protein_coding Danio_rerio
ENSDARG00000075834 si:dkey-182i3.8 si:dkey-182i3.8 protein_coding Danio_rerio
ENSDARG00000086182 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000086278 CABZ01050664.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086368 BX663505.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086510 si:ch211-207e19.14 si:ch211-207e19.14 protein_coding Danio_rerio
ENSDARG00000086720 zgc:173603 zgc:173603 protein_coding Danio_rerio
ENSDARG00000086845 CABZ01021430.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086975 CR812792.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087249 si:dkey-7i4.17 si:dkey-7i4.17 protein_coding Danio_rerio
ENSDARG00000087320 CABZ01017734.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087355 BX294653.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087700 si:ch211-229l10.12 si:ch211-229l10.12 protein_coding Danio_rerio
ENSDARG00000087824 BX324179.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087864 BX511066.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088378 si:dkeyp-4f2.4 si:dkeyp-4f2.4 protein_coding Danio_rerio
ENSDARG00000089186 CR388390.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089344 BX640461.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089363 CABZ01002718.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089587 CR450785.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090043 CABZ01054392.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090377 CABZ01003344.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090400 CR388363.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090420 BX511078.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090979 si:dkey-78o7.1 si:dkey-78o7.1 protein_coding Danio_rerio
ENSDARG00000091284 si:dkey-78k22.1 si:dkey-78k22.1 protein_coding Danio_rerio
ENSDARG00000091364 si:dkey-77p23.3 si:dkey-77p23.3 protein_coding Danio_rerio
ENSDARG00000091524 si:ch211-162i8.3 si:ch211-162i8.3 protein_coding Danio_rerio
ENSDARG00000091688 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000091793 CABZ01071911.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092000 si:ch211-286l10.1 si:ch211-286l10.1 protein_coding Danio_rerio
ENSDARG00000092215 BX901907.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092244 BX005085.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092268 CT573263.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092435 BX640584.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093143 si:dkey-77f5.5 si:dkey-77f5.5 protein_coding Danio_rerio
ENSDARG00000093500 si:ch211-120c15.2 si:ch211-120c15.2 protein_coding Danio_rerio
ENSDARG00000094175 si:dkey-29p23.3 si:dkey-29p23.3 protein_coding Danio_rerio
ENSDARG00000094313 CT027609.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094430 si:dkey-238o14.5 si:dkey-238o14.5 protein_coding Danio_rerio
ENSDARG00000094459 si:dkey-16p19.10 si:dkey-16p19.10 protein_coding Danio_rerio
ENSDARG00000094872 CR356223.5 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095440 si:dkeyp-53e4.2 si:dkeyp-53e4.2 protein_coding Danio_rerio
ENSDARG00000095708 si:dkey-77f5.16 si:dkey-77f5.16 protein_coding Danio_rerio
ENSDARG00000096123 si:dkey-14o6.4 si:dkey-14o6.4 protein_coding Danio_rerio
ENSDARG00000096171 si:dkey-9i5.4 si:dkey-9i5.4 protein_coding Danio_rerio
ENSG00000196967 ZNF585A zinc finger protein 585A protein_coding Homo_sapiens
ENSG00000245680 ZNF585B zinc finger protein 585B protein_coding Homo_sapiens

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