C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172448 Zfp27-201 ENSMUSG00000062040 10090 - 7:29894079-29898863 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000172448
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000172448 0.285±0.00 0.595±0.00 1.490±0.00 0.196±0.00 0.522±0.21 0.341±0.05 0.382±0.13 0.727±0.20 1.087±0.65 0.940±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WQ CIL_0004WQ_0004 CGP 7:29859979-29906572
CIL_0006DU CIL_0006DU_0002 CGP 7:29893333-29916813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252211 ZKSCAN3-201 protein_coding Homo_sapiens 7e-21 108
ENST00000292841 ZNF585A-001 protein_coding Homo_sapiens 0 1646
ENST00000322748 ZNF18-002 protein_coding Homo_sapiens 0.00005 55
ENST00000332591 ZNF484-002 protein_coding Homo_sapiens 5e-25 121
ENST00000337673 ZNF394-001 protein_coding Homo_sapiens 0.000003 58
ENST00000341464 ZKSCAN3-002 protein_coding Homo_sapiens 2e-21 108
ENST00000353796 RBAK-001 protein_coding Homo_sapiens 0.00002 57
ENST00000356958 ZNF585A-201 protein_coding Homo_sapiens 0 1646
ENST00000375495 ZNF484-001 protein_coding Homo_sapiens 5e-25 121
ENST00000377255 ZKSCAN3-001 protein_coding Homo_sapiens 7e-21 108
ENST00000392157 ZNF585A-004 protein_coding Homo_sapiens 0 1646
ENST00000395505 ZNF484-201 protein_coding Homo_sapiens 7e-25 121
ENST00000395506 ZNF484-202 protein_coding Homo_sapiens 7e-25 121
ENST00000396912 RBAK-201 protein_coding Homo_sapiens 0.00003 57
ENST00000426306 ZNF394-002 protein_coding Homo_sapiens 0.000003 58
ENST00000454073 ZNF18-004 protein_coding Homo_sapiens 0.00004 55
ENST00000527838 ZNF585B-004 protein_coding Homo_sapiens 0 1339
ENST00000531805 ZNF585B-003 protein_coding Homo_sapiens 0 1591
ENST00000532828 ZNF585B-002 protein_coding Homo_sapiens 0 1591
ENST00000580306 ZNF18-001 protein_coding Homo_sapiens 0.00004 55
ENST00000580613 ZNF18-201 protein_coding Homo_sapiens 0.00004 55

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