C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat containing 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062590 Armc9 10090 + 1:86154780-86278284 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027434 Armc9-002 86154810-86278284 protein_coding
  ENSMUST00000113309 Armc9-001 86154798-86276697 protein_coding
  ENSMUST00000123618 Armc9-003 86154780-86246326 retained_intron
  ENSMUST00000126579 Armc9-012 86244566-86269086 nonsense_mediated_decay
  ENSMUST00000131412 Armc9-008 86154815-86252489 protein_coding
  ENSMUST00000134858 Armc9-007 86154798-86179850 processed_transcript
  ENSMUST00000135973 Armc9-005 86154784-86259827 retained_intron
  ENSMUST00000150059 Armc9-011 86196390-86252392 protein_coding
  ENSMUST00000153389 Armc9-006 86154786-86170331 retained_intron
  ENSMUST00000153653 Armc9-009 86154819-86177701 retained_intron
  ENSMUST00000155168 Armc9-004 86154784-86213667 retained_intron
  ENSMUST00000156675 Armc9-010 86202496-86252489 protein_coding
  ENSMUST00000186509 Armc9-013 86154799-86164837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyOvaryTestisENSMUST00000027434ENSMUST00000113309ENSMUST00000131412ENSMUST00000135973
Transcript ID Adrenal Breast Colon Kidney Ovary Testis
ENSMUST00000027434 N/A 1.802±0.00 2.131±0.23 N/A 2.490±0.06 N/A
ENSMUST00000113309 N/A N/A N/A N/A N/A 4.381±0.00
ENSMUST00000131412 N/A N/A N/A N/A 5.047±0.00 16.923±0.56
ENSMUST00000135973 1.360±0.14 N/A N/A 1.965±0.00 3.344±0.60 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L0 CIL_0004L0_0003 CGP 1:86154780-86307305

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087299 armc9 armadillo repeat containing 9 protein_coding Danio_rerio
ENSG00000135931 ARMC9 armadillo repeat containing 9 protein_coding Homo_sapiens

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