C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027434 Armc9-002 ENSMUSG00000062590 10090 + 1:86154810-86278284 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryENSMUST00000027434
Transcript ID Breast Colon Ovary
ENSMUST00000027434 1.802±0.00 2.131±0.23 2.490±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L0 CIL_0004L0_0003 CGP 1:86154780-86307305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349938 ARMC9-001 protein_coding Homo_sapiens 0 2303
ENST00000424740 ARMC9-011 protein_coding Homo_sapiens 0 739
ENST00000428662 ARMC9-014 nonsense_mediated_decay Homo_sapiens 0 625
ENST00000436339 ARMC9-009 protein_coding Homo_sapiens 0 776
ENST00000440107 ARMC9-007 protein_coding Homo_sapiens 0 475
ENST00000444285 ARMC9-015 protein_coding Homo_sapiens 0 213
ENST00000446447 ARMC9-012 protein_coding Homo_sapiens 0 542
ENST00000467698 ARMC9-010 retained_intron Homo_sapiens 0 394
ENST00000469789 ARMC9-008 processed_transcript Homo_sapiens 0 418
ENST00000481520 ARMC9-013 retained_intron Homo_sapiens 0 743
ENST00000482392 ARMC9-006 retained_intron Homo_sapiens 0 333
ENST00000486787 ARMC9-004 retained_intron Homo_sapiens 0 316
ENST00000611582 ARMC9-003 protein_coding Homo_sapiens 0 2488
ENST00000614261 ARMC9-201 protein_coding Homo_sapiens 0 2510

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