C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: expressed sequence AI413582
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062753 AI413582 10090 - 17:27563575-27565749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080190 AI413582-003 27563771-27565708 nonsense_mediated_decay
  ENSMUST00000138728 AI413582-002 27563773-27565749 retained_intron
  ENSMUST00000145183 AI413582-004 27564682-27565667 processed_transcript
  ENSMUST00000154473 AI413582-001 27563575-27565732 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000080190ENSMUST00000138728ENSMUST00000154473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000080190 N/A 11.789±1.26 N/A N/A N/A N/A N/A N/A N/A N/A 4.157±0.00 N/A N/A
ENSMUST00000138728 3.714±0.00 14.066±3.23 N/A N/A 11.548±4.36 13.229±0.00 N/A 4.435±0.00 2.563±0.56 8.227±0.87 6.827±1.71 N/A N/A
ENSMUST00000154473 15.855±1.06 14.078±5.31 15.964±3.56 11.560±1.63 13.708±5.42 22.084±2.70 5.072±1.95 14.129±1.16 3.321±0.73 13.522±1.20 10.711±4.11 19.633±8.93 7.771±3.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000251 CIL_000251_0002 CGP 17:27422387-27563674

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090634 si:dkey-226k3.4 si:dkey-226k3.4 protein_coding Danio_rerio

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