C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: expressed sequence AI413582
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080190 AI413582-003 ENSMUSG00000062753 10090 - 17:27563771-27565708 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000080190
Transcript ID Adrenal Ovary
ENSMUST00000080190 11.789±1.26 4.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000251 CIL_000251_0002 CGP 17:27422387-27563674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335352 C6orf1-002 protein_coding Homo_sapiens 0 241
ENST00000394990 C6orf1-003 protein_coding Homo_sapiens 0 198
ENST00000413013 C6orf1-008 protein_coding Homo_sapiens 0 281
ENST00000463083 C6orf1-005 retained_intron Homo_sapiens 0 241
ENST00000468145 C6orf1-006 protein_coding Homo_sapiens 2e-34 150
ENST00000476320 C6orf1-001 protein_coding Homo_sapiens 0 289
ENST00000481533 C6orf1-004 protein_coding Homo_sapiens 0 241
ENST00000495581 C6orf1-007 retained_intron Homo_sapiens 0 289

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