C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: short coiled-coil protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063253 Scoc 10090 - 8:83434493-83458391 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081506 Scoc-201 83434493-83458391 protein_coding
  ENSMUST00000167525 Scoc-202 83434493-83442648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081506ENSMUST00000167525
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081506 1.148±0.00 1.828±0.49 N/A N/A 1.899±1.00 0.647±0.16 N/A 10.214±1.98 0.922±0.55 1.310±0.00 N/A 3.321±3.16 2.457±0.54 0.409±0.00
ENSMUST00000167525 3.996±2.45 0.644±0.14 18.098±1.99 22.941±8.54 1.516±0.34 0.543±0.16 5.707±0.80 1.670±0.61 8.750±8.75 4.677±0.28 12.347±0.76 3.157±2.26 5.423±3.49 1.709±0.89

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005802 IEA trans-Golgi network
GO:0016020 IEA membrane
GO:0016239 IEA positive regulation of macroautophagy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087333 scoca short coiled-coil protein a protein_coding Danio_rerio
ENSG00000153130 SCOC short coiled-coil protein protein_coding Homo_sapiens

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