C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: short coiled-coil protein a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000087333 scoca 7955 + 1:40955058-40962131 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000122059 scoca-001 40955058-40962131 protein_coding
  ENSDART00000135578 scoca-003 40959516-40961268 protein_coding
  ENSDART00000137047 scoca-002 40959496-40961345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000122059ENSDART00000135578ENSDART00000137047
Transcript ID Brain Heart Kidney Liver
ENSDART00000122059 N/A N/A 1.123±0.00 0.167±0.00
ENSDART00000135578 N/A N/A N/A 0.442±0.00
ENSDART00000137047 6.660±0.00 2.734±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046O CIL_00046O_0001 CGP 1:40726408-40962131
CIL_0006MV CIL_0006MV_0001 CGP 1:40955058-41000910

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000153130 SCOC short coiled-coil protein protein_coding Homo_sapiens
ENSMUSG00000063253 Scoc short coiled-coil protein protein_coding Mus_musculus

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