C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 3300002I08 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000051153 3300002I08Rik-001 ENSMUSG00000063364 10090 - 2:150310935-150362765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051153 0.258±0.01 0.774±0.00 0.484±0.21 0.607±0.16 0.770±0.41 0.280±0.00 0.129±0.00 0.542±0.16 0.227±0.00 0.208±0.05 0.136±0.02 0.741±0.28 0.202±0.00 0.262±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306908 ZNF57-001 protein_coding Homo_sapiens 1e-20 106
ENST00000314531 ZNF77-001 protein_coding Homo_sapiens 8e-22 110
ENST00000334241 ZNF555-001 protein_coding Homo_sapiens 2e-19 104
ENST00000354656 ZNF44-004 nonsense_mediated_decay Homo_sapiens 7e-22 108
ENST00000355684 ZNF44-003 protein_coding Homo_sapiens 3e-21 108
ENST00000356109 ZNF44-002 protein_coding Homo_sapiens 4e-21 108
ENST00000393337 ZNF44-006 nonsense_mediated_decay Homo_sapiens 4e-21 108
ENST00000397742 ZNF44-001 nonsense_mediated_decay Homo_sapiens 3e-21 108
ENST00000414892 ZNF625-005 protein_coding Homo_sapiens 3e-31 139
ENST00000418638 RP6-204F4.2-001 processed_pseudogene Homo_sapiens 3e-22 110
ENST00000430024 ZNF625-ZNF20-001 nonsense_mediated_decay Homo_sapiens 1e-30 139
ENST00000434822 ZNF625-ZNF20-002 nonsense_mediated_decay Homo_sapiens 1e-29 135
ENST00000439152 ZNF101P2-001 processed_pseudogene Homo_sapiens 2e-25 121
ENST00000439556 ZNF625-004 protein_coding Homo_sapiens 6e-31 139
ENST00000455799 ZNF625-002 protein_coding Homo_sapiens 1e-29 135
ENST00000522294 ZNF57-003 protein_coding Homo_sapiens 3e-21 106
ENST00000523428 ZNF57-002 protein_coding Homo_sapiens 9e-21 106
ENST00000585966 ZNF555-002 protein_coding Homo_sapiens 8e-21 104
ENST00000590305 ZNF57-004 protein_coding Homo_sapiens 3e-21 106
ENST00000591539 ZNF555-003 protein_coding Homo_sapiens 4e-20 104
ENST00000600003 ZNF44-007 nonsense_mediated_decay Homo_sapiens 3e-21 108
ENST00000614108 ZNF57-201 protein_coding Homo_sapiens 1e-20 106

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