C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XXIII, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063564 Col23a1 10090 + 11:51289920-51583918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102765 Col23a1-001 51289920-51583918 protein_coding
  ENSMUST00000151098 Col23a1-002 51574432-51580299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102765ENSMUST00000151098
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102765 0.585±0.12 0.647±0.25 1.127±0.18 2.315±0.49 0.734±0.59 2.044±0.19 0.284±0.19 0.756±0.20 0.084±0.07 11.572±0.91 0.406±0.11 1.678±0.54 1.291±1.36 0.303±0.24
ENSMUST00000151098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.515±1.56 7.513±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 TAS extracellular region
GO:0005581 IEA collagen trimer
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089078 COL23A1 (1 of 2) collagen, type XXIII, alpha 1 protein_coding Danio_rerio
ENSDARG00000095339 COL23A1 (2 of 2) collagen, type XXIII, alpha 1 protein_coding Danio_rerio
ENSG00000050767 COL23A1 collagen, type XXIII, alpha 1 protein_coding Homo_sapiens

Loading