C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: crumbs homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063681 Crb1 10090 - 1:139197056-139377100 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059825 Crb1-001 139197056-139377041 protein_coding
  ENSMUST00000123065 Crb1-008 139237046-139243131 processed_transcript
  ENSMUST00000131586 Crb1-003 139229538-139377100 protein_coding
  ENSMUST00000132845 Crb1-007 139248726-139328248 nonsense_mediated_decay
  ENSMUST00000133765 Crb1-004 139245617-139255760 processed_transcript
  ENSMUST00000136062 Crb1-002 139247664-139377041 retained_intron
  ENSMUST00000137030 Crb1-006 139248741-139328268 nonsense_mediated_decay
  ENSMUST00000145244 Crb1-005 139231216-139377100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059825ENSMUST00000123065ENSMUST00000131586ENSMUST00000132845ENSMUST00000133765ENSMUST00000136062ENSMUST00000137030ENSMUST00000145244
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059825 N/A N/A 0.001±0.00 0.785±0.00 0.025±0.01 N/A 0.062±0.03 0.001±0.00 0.105±0.04 N/A 0.215±0.10 0.009±0.01 0.392±0.18
ENSMUST00000123065 N/A N/A 0.021±0.00 0.180±0.00 N/A N/A N/A N/A 0.271±0.00 N/A N/A 0.054±0.00 0.271±0.00
ENSMUST00000131586 N/A N/A N/A 0.735±0.31 N/A 0.014±0.01 0.028±0.01 0.010±0.00 0.056±0.02 0.008±0.00 0.095±0.03 0.006±0.00 0.323±0.00
ENSMUST00000132845 N/A N/A N/A N/A 0.180±0.01 N/A 0.105±0.00 N/A N/A N/A 0.563±0.17 N/A N/A
ENSMUST00000133765 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A 0.100±0.05 N/A N/A
ENSMUST00000136062 N/A N/A N/A N/A N/A 0.021±0.00 0.038±0.01 0.004±0.00 0.125±0.00 N/A N/A 0.004±0.00 N/A
ENSMUST00000137030 N/A N/A 0.065±0.00 N/A N/A 0.175±0.07 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145244 0.015±0.00 0.027±0.00 N/A 0.023±0.00 N/A 0.005±0.00 0.039±0.00 0.003±0.00 0.109±0.04 N/A 0.163±0.00 0.001±0.00 0.535±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0007009 IMP plasma membrane organization
GO:0016021 IEA integral component of membrane
GO:0042462 IMP eye photoreceptor cell development
GO:0061024 IMP membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062245 crb1 crumbs homolog 1 (Drosophila) protein_coding Danio_rerio
ENSG00000134376 CRB1 crumbs family member 1, photoreceptor morphogenesis associated protein_coding Homo_sapiens

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