C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crumbs homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059825 Crb1-001 ENSMUSG00000063681 10090 - 1:139197056-139377041 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000059825
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000059825 0.001±0.00 0.785±0.00 0.025±0.01 0.062±0.03 0.001±0.00 0.105±0.04 0.215±0.10 0.009±0.01 0.392±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0007009 IMP plasma membrane organization
GO:0016021 IEA integral component of membrane
GO:0042462 IMP eye photoreceptor cell development
GO:0061024 IMP membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367397 CRB1-003 protein_coding Homo_sapiens 0 2412
ENST00000367399 CRB1-005 protein_coding Homo_sapiens 0 2819
ENST00000367400 CRB1-004 protein_coding Homo_sapiens 0 3764
ENST00000475659 CRB1-006 retained_intron Homo_sapiens 0 1103
ENST00000480086 CRB1-007 processed_transcript Homo_sapiens 0 340
ENST00000484075 CRB1-001 nonsense_mediated_decay Homo_sapiens 0 3615
ENST00000535699 CRB1-201 protein_coding Homo_sapiens 0 2348
ENST00000538660 CRB1-202 protein_coding Homo_sapiens 0 1871

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