C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sideroflexin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063698 Sfxn4 10090 - 19:60837277-60861479 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080806 Sfxn4-002 60837277-60861427 nonsense_mediated_decay
  ENSMUST00000124921 Sfxn4-003 60838758-60861424 nonsense_mediated_decay
  ENSMUST00000135808 Sfxn4-001 60838748-60861479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080806ENSMUST00000124921ENSMUST00000135808
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080806 N/A 0.479±0.28 0.868±0.00 1.057±0.19 0.184±0.00 0.198±0.03 N/A N/A 0.175±0.09 N/A 0.133±0.02 0.936±0.44 0.102±0.00 0.082±0.00
ENSMUST00000124921 N/A N/A N/A N/A N/A 0.256±0.00 0.323±0.00 N/A 0.322±0.04 N/A N/A 0.820±0.30 0.138±0.00 0.356±0.00
ENSMUST00000135808 2.583±1.07 0.864±0.27 2.532±0.65 2.216±0.34 0.938±0.20 0.219±0.09 1.564±0.08 1.549±0.25 0.539±0.09 1.418±0.32 0.643±0.22 1.173±0.61 1.276±0.54 0.421±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004H3 CIL_0004H3_0003 CGP 19:60811585-60861479
CIL_0004GQ CIL_0004GQ_0003 CGP 19:60837277-60874556

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 ISA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0008150 ND biological_process
GO:0008324 IEA cation transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0055072 IEA iron ion homeostasis
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069832 sfxn4 sideroflexin 4 protein_coding Danio_rerio
ENSG00000183605 SFXN4 sideroflexin 4 protein_coding Homo_sapiens

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