C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier organic anion transporter family, member 1a5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063975 Slco1a5 10090 - 6:142234227-142322981 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081380 Slco1a5-001 142234227-142322981 protein_coding
  ENSMUST00000111822 Slco1a5-003 142247583-142278836 retained_intron
  ENSMUST00000111825 Slco1a5-002 142234227-142278836 protein_coding
  ENSMUST00000128446 Slco1a5-005 142254460-142322948 protein_coding
  ENSMUST00000153268 Slco1a5-004 142234227-142275568 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENSMUST00000081380ENSMUST00000111822ENSMUST00000111825ENSMUST00000128446ENSMUST00000153268
Transcript ID Adipose Bladder Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000081380 N/A N/A 0.076±0.01 0.119±0.03 N/A 0.056±0.00 0.055±0.01 0.014±0.00 0.681±0.48 N/A 0.187±0.09
ENSMUST00000111822 N/A N/A N/A 0.069±0.03 N/A N/A N/A N/A N/A 0.007±0.00 0.052±0.00
ENSMUST00000111825 N/A N/A N/A 0.050±0.03 N/A N/A 0.162±0.07 N/A N/A N/A 0.039±0.00
ENSMUST00000128446 N/A N/A N/A 0.363±0.00 N/A N/A 0.618±0.00 0.047±0.00 0.552±0.12 N/A N/A
ENSMUST00000153268 0.034±0.01 0.003±0.00 N/A 0.265±0.09 0.051±0.00 0.030±0.00 0.176±0.00 N/A 0.162±0.06 0.019±0.02 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PZ CIL_0005PZ_0002 CGP 6:142234227-142322981

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005887 ISO integral component of plasma membrane
GO:0008028 IEA monocarboxylic acid transmembrane transporter activity
GO:0015125 ISO bile acid transmembrane transporter activity
GO:0015349 IEA thyroid hormone transmembrane transporter activity
GO:0015718 IEA monocarboxylic acid transport
GO:0015721 IEA bile acid and bile salt transport
GO:0031100 IEA organ regeneration
GO:0031526 IEA brush border membrane
GO:0050892 IEA intestinal absorption
GO:0070327 IEA thyroid hormone transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000084453 SLCO1A2 solute carrier organic anion transporter family, member 1A2 protein_coding Homo_sapiens

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