C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB44, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000064147 Rab44 10090 + 17:29135056-29148980 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087942 Rab44-001 29135056-29148980 protein_coding
  ENSMUST00000139931 Rab44-002 29136338-29148243 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087942ENSMUST00000139931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087942 0.645±0.37 0.183±0.05 0.126±0.01 0.043±0.00 0.540±0.33 0.190±0.03 0.042±0.01 0.053±0.02 3.280±3.06 2.479±0.32 0.042±0.01 0.338±0.24 0.041±0.03 0.304±0.21
ENSMUST00000139931 1.408±0.00 N/A 0.357±0.00 0.094±0.03 1.021±0.17 N/A 0.119±0.01 0.096±0.02 4.010±2.75 N/A 0.161±0.11 0.485±0.29 0.104±0.05 0.569±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YD CIL_0002YD_0002 CGP 17:29090979-29148980
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0002YC CIL_0002YC_0002 CGP 17:29135056-29237797

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028389 rab44 RAB44, member RAS oncogene family protein_coding Danio_rerio
ENSG00000255587 RAB44 RAB44, member RAS oncogene family protein_coding Homo_sapiens

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