C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000255587-ENSG00000124772 CGP 9606 6:36697851-36840002
GeneTranscriptPositionBiotype
ENSG00000124772 (CPNE5)
copine V
ENST00000244751 (CPNE5-001) 36740778-36840002 protein_coding
ENST00000393189 (CPNE5-201) 36740778-36757409 protein_coding
ENST00000459703 (CPNE5-002) 36740775-36757381 processed_transcript
ENST00000493411 (CPNE5-003) 36745387-36757381 processed_transcript
ENSG00000220349 (RP3-431A14.4)
ENST00000494644 (RP3-431A14.4-001) 36737050-36737986 processed_pseudogene
ENSG00000255587 (RAB44)
RAB44, member RAS oncogene family
ENST00000229824 (RAB44-001) 36715465-36733183 protein_coding
ENST00000612677 (RAB44-201) 36697851-36733183 protein_coding
CIL_0002YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000064147-ENSMUSG00000024008 CGP 10090 17:29135056-29237797
GeneTranscriptPositionBiotype
ENSMUSG00000024008 (Cpne5)
copine V
ENSMUST00000024805 (Cpne5-001) 29156550-29237797 protein_coding
ENSMUST00000124917 (Cpne5-005) 29169437-29176683 processed_transcript
ENSMUST00000126755 (Cpne5-002) 29217862-29237712 retained_intron
ENSMUST00000126993 (Cpne5-004) 29157916-29184103 processed_transcript
ENSMUST00000137727 (Cpne5-003) 29188334-29237759 protein_coding
ENSMUSG00000064147 (Rab44)
RAB44, member RAS oncogene family
ENSMUST00000087942 (Rab44-001) 29135056-29148980 protein_coding
ENSMUST00000139931 (Rab44-002) 29136338-29148243 processed_transcript
ENSMUSG00000067575 (Rpl35a-ps3)
ribosomal protein L35A, pseudogene 3
ENSMUST00000147311 (Rpl35a-ps3-001) 29136972-29137304 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YC_0001ENSG00000124772ENST00000244751ENST00000393189ENST00000459703ENST00000493411ENSG00000220349ENST00000494644ENSG00000255587ENST00000229824ENST00000612677CIL_0002YC_0002ENSMUSG00000024008ENSMUST00000024805ENSMUST00000124917ENSMUST00000126755ENSMUST00000126993ENSMUST00000137727ENSMUSG00000064147ENSMUST00000087942ENSMUST00000139931ENSMUSG00000067575ENSMUST00000147311
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YC_0001ENSG00000124772ENST00000244751ENST00000393189ENST00000459703ENST00000493411ENSG00000220349ENST00000494644ENSG00000255587ENST00000229824ENST00000612677CIL_0002YC_0002ENSMUSG00000024008ENSMUST00000024805ENSMUST00000124917ENSMUST00000126755ENSMUST00000126993ENSMUST00000137727ENSMUSG00000064147ENSMUST00000087942ENSMUST00000139931ENSMUSG00000067575ENSMUST00000147311
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124772 ENST00000244751 0.442±0.00 0.905±0.00 0.276±0.00 7.178±5.66 0.093±0.00 1.016±0.00 3.682±2.79 N/A 0.059±0.04 0.285±0.00 0.196±0.00 1.238±0.81 0.316±0.17 3.831±0.30
ENST00000393189 N/A 2.695±0.00 N/A N/A 0.283±0.00 0.229±0.00 N/A N/A N/A 0.885±0.00 N/A 0.633±0.00 N/A N/A
ENST00000459703 0.085±0.00 5.450±0.00 N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A 0.308±0.24 0.107±0.00 N/A
ENST00000493411 N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A 0.286±0.00 N/A N/A N/A
ENSG00000220349 ENST00000494644 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A
ENSG00000255587 ENST00000229824 0.083±0.00 0.181±0.00 N/A N/A 0.024±0.01 0.080±0.00 0.017±0.00 0.019±0.00 N/A N/A 0.083±0.00 0.038±0.02 0.012±0.00 0.088±0.04
ENST00000612677 N/A 0.067±0.00 N/A 0.020±0.00 N/A N/A N/A N/A 0.111±0.11 0.646±0.00 N/A 0.047±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024008 ENSMUST00000024805 N/A 0.142±0.09 N/A 1.885±1.32 N/A 0.065±0.01 0.275±0.02 N/A 0.012±0.00 0.417±0.00 N/A 0.508±0.05 0.229±0.13 0.390±0.00
ENSMUST00000124917 N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A
ENSMUST00000126755 0.046±0.00 0.070±0.03 0.154±0.02 N/A 0.100±0.02 0.078±0.02 N/A 0.090±0.01 0.035±0.01 N/A 0.056±0.03 0.102±0.03 0.204±0.13 0.145±0.00
ENSMUST00000126993 1.633±1.54 0.496±0.16 0.316±0.05 9.245±7.95 0.497±0.19 0.420±0.04 1.410±0.66 0.252±0.13 0.091±0.03 2.760±1.14 0.070±0.00 2.326±1.35 0.876±0.75 7.388±3.05
ENSMUST00000137727 N/A N/A N/A 34.515±0.00 N/A N/A 2.736±0.59 N/A N/A N/A N/A 0.448±0.00 0.998±0.00 2.419±0.00
ENSMUSG00000064147 ENSMUST00000087942 0.645±0.37 0.183±0.05 0.126±0.01 0.043±0.00 0.540±0.33 0.190±0.03 0.042±0.01 0.053±0.02 3.280±3.06 2.479±0.32 0.042±0.01 0.338±0.24 0.041±0.03 0.304±0.21
ENSMUST00000139931 1.408±0.00 N/A 0.357±0.00 0.094±0.03 1.021±0.17 N/A 0.119±0.01 0.096±0.02 4.010±2.75 N/A 0.161±0.11 0.485±0.29 0.104±0.05 0.569±0.46
ENSMUSG00000067575 ENSMUST00000147311 N/A N/A 12.042±0.00 3.752±0.00 N/A N/A N/A N/A 24.548±5.06 N/A N/A N/A N/A N/A

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