C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002YD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124762-ENSG00000255587 CGP 9606 6:36676460-36733183
GeneTranscriptPositionBiotype
ENSG00000124762 (CDKN1A)
cyclin-dependent kinase inhibitor 1A (p21, Cip1)
ENST00000244741 (CDKN1A-001) 36678658-36687339 protein_coding
ENST00000373711 (CDKN1A-002) 36678721-36685924 protein_coding
ENST00000405375 (CDKN1A-201) 36678710-36687337 protein_coding
ENST00000448526 (CDKN1A-202) 36676490-36687337 protein_coding
ENST00000459970 (CDKN1A-005) 36676528-36684511 processed_transcript
ENST00000462537 (CDKN1A-003) 36678771-36680857 processed_transcript
ENST00000478800 (CDKN1A-004) 36678726-36684498 processed_transcript
ENST00000615513 (CDKN1A-203) 36676460-36687337 protein_coding
ENSG00000255587 (RAB44)
RAB44, member RAS oncogene family
ENST00000229824 (RAB44-001) 36715465-36733183 protein_coding
ENST00000612677 (RAB44-201) 36697851-36733183 protein_coding
CIL_0002YD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023067-ENSMUSG00000064147 CGP 10090 17:29090979-29148980
GeneTranscriptPositionBiotype
ENSMUSG00000023067 (Cdkn1a)
cyclin-dependent kinase inhibitor 1A (P21)
ENSMUST00000023829 (Cdkn1a-001) 29093772-29100722 protein_coding
ENSMUST00000119901 (Cdkn1a-003) 29090979-29099527 protein_coding
ENSMUST00000122348 (Cdkn1a-002) 29098207-29099569 protein_coding
ENSMUSG00000064147 (Rab44)
RAB44, member RAS oncogene family
ENSMUST00000087942 (Rab44-001) 29135056-29148980 protein_coding
ENSMUST00000139931 (Rab44-002) 29136338-29148243 processed_transcript
ENSMUSG00000067575 (Rpl35a-ps3)
ribosomal protein L35A, pseudogene 3
ENSMUST00000147311 (Rpl35a-ps3-001) 29136972-29137304 processed_pseudogene
ENSMUSG00000084956 (Gm16194)
predicted gene 16194
ENSMUST00000132262 (Gm16194-002) 29114170-29133699 lincRNA
ENSMUST00000138816 (Gm16194-004) 29114199-29133811 lincRNA
ENSMUST00000141239 (Gm16194-003) 29114181-29121008 lincRNA
ENSMUST00000141797 (Gm16194-001) 29114145-29133693 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YD_0001ENSG00000124762ENST00000244741ENST00000373711ENST00000405375ENST00000448526ENST00000459970ENST00000462537ENST00000478800ENST00000615513ENSG00000255587ENST00000229824ENST00000612677CIL_0002YD_0002ENSMUSG00000023067ENSMUST00000023829ENSMUST00000119901ENSMUST00000122348ENSMUSG00000064147ENSMUST00000087942ENSMUST00000139931ENSMUSG00000067575ENSMUST00000147311ENSMUSG00000084956ENSMUST00000132262ENSMUST00000138816ENSMUST00000141239ENSMUST00000141797
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YD_0001ENSG00000124762ENST00000244741ENST00000405375ENST00000448526ENST00000478800ENSG00000255587ENST00000229824ENST00000612677CIL_0002YD_0002ENSMUSG00000023067ENSMUST00000023829ENSMUST00000119901ENSMUSG00000064147ENSMUST00000087942ENSMUST00000139931ENSMUSG00000067575ENSMUST00000147311ENSMUSG00000084956ENSMUST00000132262ENSMUST00000138816ENSMUST00000141239ENSMUST00000141797
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124762 ENST00000244741 97.104±0.00 32.758±0.00 N/A 29.020±0.00 16.629±9.67 96.658±0.00 15.713±14.83 60.138±0.00 12.784±10.88 195.197±0.00 93.364±0.00 73.113±61.30 37.156±18.14 24.096±17.08
ENST00000373711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405375 N/A N/A N/A N/A N/A N/A N/A N/A 3.916±0.00 57.572±0.00 6.199±0.00 N/A N/A N/A
ENST00000448526 N/A N/A N/A 1.007±0.00 N/A 8.053±0.00 N/A 0.972±0.00 N/A N/A 2.543±0.00 52.852±0.00 N/A 32.756±0.00
ENST00000459970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478800 N/A N/A 1.437±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255587 ENST00000229824 0.083±0.00 0.181±0.00 N/A N/A 0.024±0.01 0.080±0.00 0.017±0.00 0.019±0.00 N/A N/A 0.083±0.00 0.038±0.02 0.012±0.00 0.088±0.04
ENST00000612677 N/A 0.067±0.00 N/A 0.020±0.00 N/A N/A N/A N/A 0.111±0.11 0.646±0.00 N/A 0.047±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023067 ENSMUST00000023829 30.693±19.86 21.250±1.34 16.698±3.33 6.585±3.21 19.023±3.57 118.302±2.63 12.252±0.95 5.825±0.39 6.752±6.87 44.547±1.08 5.142±1.98 27.150±9.92 8.947±3.77 3.102±1.91
ENSMUST00000119901 N/A 7.589±1.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064147 ENSMUST00000087942 0.645±0.37 0.183±0.05 0.126±0.01 0.043±0.00 0.540±0.33 0.190±0.03 0.042±0.01 0.053±0.02 3.280±3.06 2.479±0.32 0.042±0.01 0.338±0.24 0.041±0.03 0.304±0.21
ENSMUST00000139931 1.408±0.00 N/A 0.357±0.00 0.094±0.03 1.021±0.17 N/A 0.119±0.01 0.096±0.02 4.010±2.75 N/A 0.161±0.11 0.485±0.29 0.104±0.05 0.569±0.46
ENSMUSG00000067575 ENSMUST00000147311 N/A N/A 12.042±0.00 3.752±0.00 N/A N/A N/A N/A 24.548±5.06 N/A N/A N/A N/A N/A
ENSMUSG00000084956 ENSMUST00000132262 0.223±0.17 N/A N/A 0.045±0.00 0.377±0.09 N/A 0.313±0.01 N/A 4.058±1.54 N/A N/A 0.485±0.01 N/A N/A
ENSMUST00000138816 0.478±0.00 N/A N/A 0.173±0.07 0.827±0.38 N/A 0.829±0.00 N/A 2.490±0.87 N/A 0.261±0.00 0.654±0.10 0.032±0.00 N/A
ENSMUST00000141239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00 0.373±0.00 N/A N/A
ENSMUST00000141797 0.163±0.00 0.190±0.04 N/A 0.069±0.00 0.903±0.41 N/A N/A N/A 3.269±0.87 N/A N/A 0.197±0.08 0.017±0.00 0.091±0.00

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