C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine rich, DPF motif domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000064284 Cdpf1 10090 - 15:85806972-85811697 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071876 Cdpf1-001 85806972-85811696 protein_coding
  ENSMUST00000125947 Cdpf1-003 85807247-85811090 protein_coding
  ENSMUST00000134631 Cdpf1-004 85807200-85811654 protein_coding
  ENSMUST00000144067 Cdpf1-005 85807244-85811644 protein_coding
  ENSMUST00000150995 Cdpf1-002 85807257-85811697 protein_coding
  ENSMUST00000154814 Cdpf1-006 85808228-85811659 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071876ENSMUST00000144067ENSMUST00000150995ENSMUST00000154814
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071876 4.716±2.18 3.795±0.74 7.089±1.11 3.648±1.80 3.866±1.20 7.159±1.84 5.480±0.97 6.476±1.13 3.526±1.42 5.106±1.25 15.923±0.60 5.712±3.36 8.085±2.19 5.144±1.22
ENSMUST00000144067 3.670±1.56 2.281±0.00 5.347±1.18 1.275±0.06 2.169±0.05 3.850±0.65 N/A 2.811±0.43 2.659±0.92 2.660±0.29 N/A 3.678±1.30 2.822±0.45 5.466±0.58
ENSMUST00000150995 6.215±1.91 14.508±1.66 N/A 5.288±4.49 5.998±1.31 11.620±1.02 5.648±0.48 10.057±1.80 4.692±1.27 7.304±1.29 N/A 7.087±3.75 10.338±5.77 4.722±0.00
ENSMUST00000154814 8.543±3.26 12.030±2.97 N/A N/A 6.478±1.48 10.372±1.24 7.571±1.48 9.554±1.90 5.837±3.80 8.978±1.38 N/A 9.414±3.04 8.047±0.51 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Q1 CIL_0001Q1_0002 CGP 15:85734983-85811697
CIL_00054A CIL_00054A_0002 CGP 15:85806972-85821733

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095705 CDPF1 cysteine-rich, DPF motif domain containing 1 protein_coding Danio_rerio
ENSG00000205643 CDPF1 cysteine-rich, DPF motif domain containing 1 protein_coding Homo_sapiens

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