C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine rich, DPF motif domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154814 Cdpf1-006 ENSMUSG00000064284 10090 - 15:85808228-85811659 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000154814
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000154814 8.543±3.26 12.030±2.97 6.478±1.48 10.372±1.24 7.571±1.48 9.554±1.90 5.837±3.80 8.978±1.38 9.414±3.04 8.047±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Q1 CIL_0001Q1_0002 CGP 15:85734983-85811697
CIL_00054A CIL_00054A_0002 CGP 15:85806972-85821733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314567 CDPF1-001 protein_coding Homo_sapiens 0 193
ENST00000381037 CDPF1-002 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000404744 CDPF1-004 protein_coding Homo_sapiens 0 198
ENST00000474256 CDPF1-005 processed_transcript Homo_sapiens 4e-29 132

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