C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box-containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067081 Asb18 10090 - 1:89950220-90014666 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086882 Asb18-001 89950220-90014577 protein_coding
  ENSMUST00000097656 Asb18-201 89952591-90014666 protein_coding
  ENSMUST00000151330 Asb18-003 89952679-90014577 nonsense_mediated_decay
  ENSMUST00000154228 Asb18-002 89952678-90014577 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000086882
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000086882 2.253±1.46 0.039±0.02 0.743±0.01 0.576±0.21 0.180±0.04 0.186±0.05 2.930±0.55 1.041±0.22 0.382±0.22 0.531±0.25 4.281±0.48 0.652±0.14 0.659±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U0 CIL_0007U0_0002 VISTA 1:89413750-90014911
CIL_0007RK CIL_0007RK_0002 VISTA 1:89547708-90149945
CIL_0008K4 CIL_0008K4_0002 VISTA 1:89625517-90226000
CIL_0007XN CIL_0007XN_0002 VISTA 1:89706775-90307806
CIL_0003RD CIL_0003RD_0002 CGP 1:89927956-90014666
CIL_0008Q8 CIL_0008Q8_0002 VISTA 1:89946249-90547693
CIL_0002YM CIL_0002YM_0002 CGP 1:89950220-90153401

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012948 asb18 ankyrin repeat and SOCS box containing 18 protein_coding Danio_rerio
ENSG00000182177 ASB18 ankyrin repeat and SOCS box containing 18 protein_coding Homo_sapiens

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