C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 5430421N21 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067613 5430421N21Rik 10090 - 15:101485131-101491512 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023718 5430421N21Rik-001 101485131-101491512 protein_coding
  ENSMUST00000159029 5430421N21Rik-002 101485131-101488068 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023718ENSMUST00000159029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023718 5.204±0.76 N/A 0.021±0.00 0.008±0.00 0.093±0.02 0.156±0.07 N/A N/A N/A 1.122±0.00 0.380±0.25 N/A 0.044±0.03
ENSMUST00000159029 2.384±0.14 0.104±0.05 0.020±0.00 N/A 0.132±0.07 0.281±0.16 0.058±0.02 0.056±0.01 0.097±0.05 N/A 0.616±0.35 0.005±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0016 CGP 15:101473478-101491512
CIL_00033Q CIL_00033Q_0015 CGP 15:101485131-101532820

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio
ENSG00000170442 KRT86 keratin 86 protein_coding Homo_sapiens
ENSG00000170523 KRT83 keratin 83 protein_coding Homo_sapiens
ENSG00000205426 KRT81 keratin 81 protein_coding Homo_sapiens

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