C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 5430421N21 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159029 5430421N21Rik-002 ENSMUSG00000067613 10090 - 15:101485131-101488068 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000159029
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000159029 2.384±0.14 0.104±0.05 0.020±0.00 0.132±0.07 0.281±0.16 0.058±0.02 0.056±0.01 0.097±0.05 0.616±0.35 0.005±0.00 0.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0016 CGP 15:101473478-101491512
CIL_00033Q CIL_00033Q_0015 CGP 15:101485131-101532820

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081223 krt5-201 protein_coding Danio_rerio 5e-26 122
ENSDART00000146185 krt5-003 protein_coding Danio_rerio 5e-26 122
ENSDART00000129044 krt5-001 protein_coding Danio_rerio 5e-26 122
ENST00000257901 KRT85-001 protein_coding Homo_sapiens 0 721
ENST00000257951 KRT84-001 protein_coding Homo_sapiens 0 344
ENST00000257974 KRT82-001 protein_coding Homo_sapiens 0 309
ENST00000293525 KRT86-201 protein_coding Homo_sapiens 0 701
ENST00000293670 KRT83-001 protein_coding Homo_sapiens 0 817
ENST00000327741 KRT81-001 protein_coding Homo_sapiens 0 811
ENST00000423955 KRT86-001 protein_coding Homo_sapiens 0 701
ENST00000529785 KRT87P-001 processed_transcript Homo_sapiens 0 767
ENST00000534226 KRT87P-002 transcribed_unprocessed_pseudogene Homo_sapiens 0 809
ENST00000544265 KRT85-002 protein_coding Homo_sapiens 0 721
ENST00000615839 KRT81-201 protein_coding Homo_sapiens 0 811
ENST00000620027 KRT123P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 422

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