C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCY1-like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069539 Scyl2 10090 - 10:89638721-89686285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092227 Scyl2-002 89639952-89686268 protein_coding
  ENSMUST00000105294 Scyl2-003 89639669-89654471 processed_transcript
  ENSMUST00000173526 Scyl2-007 89649752-89654175 retained_intron
  ENSMUST00000174252 Scyl2-001 89638721-89686285 protein_coding
  ENSMUST00000174429 Scyl2-005 89675644-89686263 retained_intron
  ENSMUST00000174492 Scyl2-004 89650750-89660161 protein_coding
  ENSMUST00000174575 Scyl2-006 89667425-89686268 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092227ENSMUST00000105294ENSMUST00000174252
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092227 2.686±0.75 10.460±4.53 6.046±0.47 6.460±2.43 2.763±1.58 4.118±1.60 1.698±0.83 4.592±0.52 3.697±1.64 4.553±2.06 1.522±0.33 5.772±1.71 6.383±1.01 2.368±0.77
ENSMUST00000105294 2.446±0.48 N/A N/A 5.753±3.07 2.129±0.43 N/A 0.876±0.18 3.757±0.00 2.814±1.14 2.818±0.00 0.914±0.15 3.600±0.89 5.136±2.72 3.845±2.41
ENSMUST00000174252 1.678±0.47 N/A 2.761±0.38 4.983±1.72 2.152±1.29 2.290±0.57 0.843±0.19 2.078±0.52 2.299±1.00 2.243±0.74 1.392±0.28 2.611±0.90 3.284±0.52 1.454±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002092 IEA positive regulation of receptor internalization
GO:0004672 IEA protein kinase activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0008333 IEA endosome to lysosome transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway
GO:2000286 IEA receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 IEA positive regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032627 SCYL2 SCY1-like 2 (S. cerevisiae) protein_coding Danio_rerio
ENSG00000136021 SCYL2 SCY1-like 2 (S. cerevisiae) protein_coding Homo_sapiens

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