C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCY1-like 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174252 Scyl2-001 ENSMUSG00000069539 10090 - 10:89638721-89686285 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000174252
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000174252 1.678±0.47 2.761±0.38 4.983±1.72 2.152±1.29 2.290±0.57 0.843±0.19 2.078±0.52 2.299±1.00 2.243±0.74 1.392±0.28 2.611±0.90 3.284±0.52 1.454±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002092 IEA positive regulation of receptor internalization
GO:0004672 IEA protein kinase activity
GO:0005102 IEA receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0008333 IEA endosome to lysosome transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway
GO:2000286 IEA receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 IEA positive regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360820 SCYL2-001 protein_coding Homo_sapiens 0 3613
ENST00000392253 AC007256.5-001 processed_pseudogene Homo_sapiens 0 3000
ENST00000547202 SCYL2-011 retained_intron Homo_sapiens 0 315
ENST00000547735 SCYL2-010 retained_intron Homo_sapiens 0 337
ENST00000548392 SCYL2-004 protein_coding Homo_sapiens 0 797
ENST00000549486 SCYL2-005 retained_intron Homo_sapiens 0 255
ENST00000549687 SCYL2-002 protein_coding Homo_sapiens 0 2693
ENST00000550067 SCYL2-006 processed_transcript Homo_sapiens 0 551
ENST00000550251 SCYL2-008 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000553148 SCYL2-007 retained_intron Homo_sapiens 0 359

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