C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCO cytochrome oxidase deficient homolog 1 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069844 Sco1 10090 + 11:67052670-67067070 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000092996 Sco1-001 67052670-67065572 protein_coding
  ENSMUST00000108690 Sco1-002 67052670-67065331 protein_coding
  ENSMUST00000136984 Sco1-003 67053775-67064076 processed_transcript
  ENSMUST00000137779 Sco1-004 67058327-67067070 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092996ENSMUST00000108690ENSMUST00000136984ENSMUST00000137779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092996 0.819±0.00 N/A 2.280±0.30 1.384±0.44 0.760±0.00 N/A 0.880±0.00 0.772±0.22 1.806±0.88 0.464±0.00 1.128±0.39 1.052±0.29 3.430±0.52 0.199±0.00
ENSMUST00000108690 2.226±0.62 14.740±1.55 N/A 0.960±0.27 2.894±1.07 9.627±2.51 3.468±0.67 2.442±0.54 4.016±0.53 1.954±0.05 0.604±0.24 3.447±1.53 3.124±1.98 0.618±0.12
ENSMUST00000136984 N/A N/A N/A 6.028±0.00 N/A N/A N/A N/A N/A N/A N/A 7.502±3.66 20.175±7.96 3.231±0.00
ENSMUST00000137779 0.570±0.00 N/A 0.879±0.00 1.155±0.00 0.298±0.06 N/A 0.386±0.00 0.666±0.09 0.719±0.27 0.713±0.00 N/A 0.797±0.39 2.081±0.27 0.241±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005507 IEA copper ion binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008150 ND biological_process
GO:0008535 IEA respiratory chain complex IV assembly
GO:0030016 ISO myofibril

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067593 SCO1 SCO1 cytochrome c oxidase assembly protein protein_coding Danio_rerio
ENSG00000133028 SCO1 SCO1 cytochrome c oxidase assembly protein protein_coding Homo_sapiens

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