C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunity-related GTPase family M member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069874 Irgm2 10090 + 11:58199618-58222779 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058704 Irgm2-201 58199618-58222771 protein_coding
  ENSMUST00000108836 Irgm2-001 58215028-58222779 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058704ENSMUST00000108836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058704 7.725±2.58 4.862±1.48 4.962±0.00 0.137±0.01 10.164±2.46 3.077±1.49 4.389±1.05 4.102±0.54 5.852±3.87 8.264±2.44 N/A 8.114±1.94 2.269±1.09 0.415±0.16
ENSMUST00000108836 5.144±0.60 2.684±0.88 15.262±5.63 0.150±0.08 7.475±4.77 3.522±2.23 1.799±0.05 2.970±1.25 7.273±4.89 5.707±2.94 3.592±0.27 5.601±2.77 1.725±0.69 0.212±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088D CIL_00088D_0002 VISTA 11:57627590-58231336

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005525 IEA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0006184 ISS GTP catabolic process
GO:0016020 IEA membrane
GO:0020003 IDA symbiont-containing vacuole
GO:0034341 IMP response to interferon-gamma
GO:0042742 IMP defense response to bacterium
GO:0042832 IDA defense response to protozoan

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000237693 IRGM immunity-related GTPase family, M protein_coding Homo_sapiens

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