C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunity-related GTPase family M member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108836 Irgm2-001 ENSMUSG00000069874 10090 + 11:58215028-58222779 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108836 5.144±0.60 2.684±0.88 15.262±5.63 0.150±0.08 7.475±4.77 3.522±2.23 1.799±0.05 2.970±1.25 7.273±4.89 5.707±2.94 3.592±0.27 5.601±2.77 1.725±0.69 0.212±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088D CIL_00088D_0002 VISTA 11:57627590-58231336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005525 IEA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0006184 ISS GTP catabolic process
GO:0016020 IEA membrane
GO:0020003 IDA symbiont-containing vacuole
GO:0034341 IMP response to interferon-gamma
GO:0042742 IMP defense response to bacterium
GO:0042832 IDA defense response to protozoan

Homologs

No Homologs available.

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